| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2889 |
|---|
| Symbol | |
|---|
| ID | 5192958 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 3279763 |
|---|
| End bp | 3280707 |
|---|
| Gene Length | 945 bp |
|---|
| Protein Length | 314 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640587337 |
|---|
| Product | acetaldehyde dehydrogenase |
|---|
| Protein accession | YP_001268203 |
|---|
| Protein GI | 148548101 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG4569] Acetaldehyde dehydrogenase (acetylating) |
|---|
| TIGRFAM ID | [TIGR03215] acetaldehyde dehydrogenase (acetylating) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.263365 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAACAC ATGATGGTAA GACCGCAGTG GCCATTATCG GTTCGGGCAA CATCGGCACC
GATCTAATGG TGAAAATCCT TCGCCATGGC AAACACCTGA GAATGGGGGC CTTCGTCGGC
ATCGATCCGG AGTCCGATGG TCTCAAGCGC GCCGAACGGA TGGGCGTGCC CACGGTGAGC
ACCGGCATCG AAGGATTATT GTCCCACCCC GATTTCGGCT CCATCGGCTT CGTATTCGAT
GCCACCAGTG CCGGCGCGCA TGCACGTCAC GAGCAACTGC TGCGGCCGCA CGGCGTACGC
GTGATCGATC TGACACCGGC GGCGATCGGG CCGTTCGTGG TGCCCGCAGT GAATATCGAA
CAGCATCTGG ATGCGCCGAA CGTCAACATG GTGACCTGTG GTGGCCAGGC GACGATTCCT
ATGGTTGCTG CTGTTTCGCG CGTCGTGCCA GTCGAGTACG CCGAGATTGT CGCTTCCATT
TCCAGTCGTT CGGCCGGACC GGGCACGCGG GCGAACATTG ACGAGTTCAC CGAGACCACC
TCCAACGCCA TCGTTCGCGT AGGTGGGGCC CAGCGTGGCA AGGCAATCAT CATCCTCAAT
CCGGCAGAGC CTCCGCTGAT CATGCGCGAC ACCGTCTACT GCCTGGTGCC GGGCCATGCG
GATCGGCAAG CGATCGTCGA GTCGGTCGAG CGTATGGCTT CCGCAGTGGC GGCATACGTG
CCTGGATATC GGCTCAAGCA GACCGTGCAG TTCGATGAGT TCAAGGGCCG CATGCCGCAG
GAAACTGGAA GCGCACAAGC ACCCCGTCTC AAGGTCTCAG TGTTCCTCGA AGTCGAGGGC
GCCGGACATT ACCTGCCGAG CTATGCCGGG AATCTGGACA TCATGACCAG CGCTGCGCTG
GCGACGGCCG AGCGCATCGC TGCCCGTCAG CCGGTGGCTG CGTAA
|
|---|
| Protein sequence | MQTHDGKTAV AIIGSGNIGT DLMVKILRHG KHLRMGAFVG IDPESDGLKR AERMGVPTVS
TGIEGLLSHP DFGSIGFVFD ATSAGAHARH EQLLRPHGVR VIDLTPAAIG PFVVPAVNIE
QHLDAPNVNM VTCGGQATIP MVAAVSRVVP VEYAEIVASI SSRSAGPGTR ANIDEFTETT
SNAIVRVGGA QRGKAIIILN PAEPPLIMRD TVYCLVPGHA DRQAIVESVE RMASAVAAYV
PGYRLKQTVQ FDEFKGRMPQ ETGSAQAPRL KVSVFLEVEG AGHYLPSYAG NLDIMTSAAL
ATAERIAARQ PVAA
|
|---|
| |