Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_2887 |
Symbol | |
ID | 5194252 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 3277239 |
End bp | 3278306 |
Gene Length | 1068 bp |
Protein Length | 355 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640587335 |
Product | enoyl-CoA hydratase/isomerase |
Protein accession | YP_001268201 |
Protein GI | 148548099 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.115929 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGATA CCGAAGTACC TGTATTGGCC GAAGTACGCA ACCGTGTGGG TCACTTGGCA CTGAATCGTC CGGTCGGGCT TAACGCGCTA ACACTGCAAA TGATTCGCAT CACTTGGCGA CAGTTGCATG CTTGGGAGAG TGATCCAGAG ATCGTCGCCG TGGTGCTGCG CGCCAATGGC GAAAAGGCAT TCTGCGCCGG TGGTGACATC CGTTCACTGT ACGACAGTTA CCAGGCAGGT GACGACCTAC ACCACGTCTT CCTTGAGGAG AAGTATTCCC TCGATCAGTA CATCCACGGC TATCCAAAAC CTATCGTTGC ACTGATGGAC GGCTTCGTCC TCGGTGGCGG CATGGGCCTG GTTCAAGGTA CAGCGCTGCG AGTTGTCACT GAGCGCGTGA AGATGGGTAT GCCTGAAACC AGCATTGGCT ATTTCCCGGA TGTCGGTGGT AGCTATTTCC TTCCTCGTCT GCCAGGTGAA CTGGGCCTCT ACCTCGGAAT TACCGGTATC CAGATCCGTG CTGCCGACGC CTTATATGCA CGCCTAGCAG ATTGGTGTTT ACCCAGCGAA AGGATCTCGG AGTTCGATCG ACGCTTGGAC CAGATTAGTT GGGGCTATGC GCCGCGCGAA ATTCTAGCCG GCCTACTTTC CAGCCTGGCC AGCAATCGGC TGCTGGGGGC GGAGCTCAAG AGCCTGCATC CCGCCATTGA TGAACATTTC ACGCAACCCG ACTTGTCGGC CATCCGCGCC TCACTGCAGG CAGAAAGGCG CCCCGAATAT CAAGATTGGG CAGAGCAGAC CGTCGAGTTG CTCAATAATC GCTCGCCGCT CGCCATGAGT GCGACCCTGA AACTCCTACG TCTAGGCCGC ACTTTGTCCC TGGCCAACTG CTTCGAGTTA GAGCTCCACC TTGAGCGGCA GTGGTTCGCC AAAGGCGATC TCATAGAAGG CGTGCGTGCC CTCCTCATCG ACAAGGATAA GACGCCACGC TGGAATCCGC CGACTTTGGA ACAGTTGGAT ACTAATCGCG TGAATGAGTT CTTTGATGGT TTCCAGCCAG CTACATGA
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Protein sequence | MSDTEVPVLA EVRNRVGHLA LNRPVGLNAL TLQMIRITWR QLHAWESDPE IVAVVLRANG EKAFCAGGDI RSLYDSYQAG DDLHHVFLEE KYSLDQYIHG YPKPIVALMD GFVLGGGMGL VQGTALRVVT ERVKMGMPET SIGYFPDVGG SYFLPRLPGE LGLYLGITGI QIRAADALYA RLADWCLPSE RISEFDRRLD QISWGYAPRE ILAGLLSSLA SNRLLGAELK SLHPAIDEHF TQPDLSAIRA SLQAERRPEY QDWAEQTVEL LNNRSPLAMS ATLKLLRLGR TLSLANCFEL ELHLERQWFA KGDLIEGVRA LLIDKDKTPR WNPPTLEQLD TNRVNEFFDG FQPAT
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