Gene Pput_2887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_2887 
Symbol 
ID5194252 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3277239 
End bp3278306 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content56% 
IMG OID640587335 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_001268201 
Protein GI148548099 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.115929 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGATA CCGAAGTACC TGTATTGGCC GAAGTACGCA ACCGTGTGGG TCACTTGGCA 
CTGAATCGTC CGGTCGGGCT TAACGCGCTA ACACTGCAAA TGATTCGCAT CACTTGGCGA
CAGTTGCATG CTTGGGAGAG TGATCCAGAG ATCGTCGCCG TGGTGCTGCG CGCCAATGGC
GAAAAGGCAT TCTGCGCCGG TGGTGACATC CGTTCACTGT ACGACAGTTA CCAGGCAGGT
GACGACCTAC ACCACGTCTT CCTTGAGGAG AAGTATTCCC TCGATCAGTA CATCCACGGC
TATCCAAAAC CTATCGTTGC ACTGATGGAC GGCTTCGTCC TCGGTGGCGG CATGGGCCTG
GTTCAAGGTA CAGCGCTGCG AGTTGTCACT GAGCGCGTGA AGATGGGTAT GCCTGAAACC
AGCATTGGCT ATTTCCCGGA TGTCGGTGGT AGCTATTTCC TTCCTCGTCT GCCAGGTGAA
CTGGGCCTCT ACCTCGGAAT TACCGGTATC CAGATCCGTG CTGCCGACGC CTTATATGCA
CGCCTAGCAG ATTGGTGTTT ACCCAGCGAA AGGATCTCGG AGTTCGATCG ACGCTTGGAC
CAGATTAGTT GGGGCTATGC GCCGCGCGAA ATTCTAGCCG GCCTACTTTC CAGCCTGGCC
AGCAATCGGC TGCTGGGGGC GGAGCTCAAG AGCCTGCATC CCGCCATTGA TGAACATTTC
ACGCAACCCG ACTTGTCGGC CATCCGCGCC TCACTGCAGG CAGAAAGGCG CCCCGAATAT
CAAGATTGGG CAGAGCAGAC CGTCGAGTTG CTCAATAATC GCTCGCCGCT CGCCATGAGT
GCGACCCTGA AACTCCTACG TCTAGGCCGC ACTTTGTCCC TGGCCAACTG CTTCGAGTTA
GAGCTCCACC TTGAGCGGCA GTGGTTCGCC AAAGGCGATC TCATAGAAGG CGTGCGTGCC
CTCCTCATCG ACAAGGATAA GACGCCACGC TGGAATCCGC CGACTTTGGA ACAGTTGGAT
ACTAATCGCG TGAATGAGTT CTTTGATGGT TTCCAGCCAG CTACATGA
 
Protein sequence
MSDTEVPVLA EVRNRVGHLA LNRPVGLNAL TLQMIRITWR QLHAWESDPE IVAVVLRANG 
EKAFCAGGDI RSLYDSYQAG DDLHHVFLEE KYSLDQYIHG YPKPIVALMD GFVLGGGMGL
VQGTALRVVT ERVKMGMPET SIGYFPDVGG SYFLPRLPGE LGLYLGITGI QIRAADALYA
RLADWCLPSE RISEFDRRLD QISWGYAPRE ILAGLLSSLA SNRLLGAELK SLHPAIDEHF
TQPDLSAIRA SLQAERRPEY QDWAEQTVEL LNNRSPLAMS ATLKLLRLGR TLSLANCFEL
ELHLERQWFA KGDLIEGVRA LLIDKDKTPR WNPPTLEQLD TNRVNEFFDG FQPAT