| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2883 |
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| Symbol | |
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| ID | 5195343 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 3274042 |
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| End bp | 3275403 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640587332 |
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| Product | aromatic hydrocarbon degradation membrane protein |
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| Protein accession | YP_001268198 |
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| Protein GI | 148548096 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2067] Long-chain fatty acid transport protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0398641 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATTG CCAGCGTGCT CGCACTGCCT TTGAGTGGAT ATGCTTTCAG TGTGCATGCT
ACACAGGTTT TCGACCTGGA AGGTTATGGA GCGATCTCTC GTGCCATGGG TGGCACCAGT
TCATCGTATT ATACCGGTAA TGCTGCGCTG ATTAGTAATC CCGCTACATT GAGTTTTGCT
CCGGACGGAA ATCAGTTTGA GCTCGGGCTG GACGTGGTGA CTACCGATAT CAAGGTTCAC
GACAGCCACG GAGCAGAGGC AAAAAGCAGC ACGAGATCCA ATAATCGAGG CCCCTATGTG
GGTCCACAAT TGAGCTATGT TGCTCAGTTG GATGACTGGC GTTTCGGTGC TGGATTGTTT
GTCAGTAGCG GGTTGGGTAC AGAGTATGGA AGTAAAAGTT TTCTATCACA GACAGAAAAC
GGAATCCAGA CCAGCTTTGA TAATTCCAGC CGTCTGATCG TATTGCGCGC TCCTATTGGC
TTTAGTTATC AAGCCACATC AAAGCTCACC TTCGGCGCTA GTGTCGATCT GGTCTGGACT
TCACTCAACC TTGAACTTCT ACTTCCATCA TCTCAGGTGG GAGCCCTGAC TGCGCAGGGG
AATCTTTCAG GCGGTTTAGT TCCCTCGCTG GCTGGATTCG TCGGGACAGG TGGTGCCGCC
CATTTCAGTC TAAGTCGCAA CAGTACCGCT GGTGGCGCCG TGGATGCGGT CGGTTGGGGC
GGGCGCTTGG GACTTACCTA CAAACTCACG GATAACACTG TCCTAGGTGC GATGTACAAC
TTCAAGACTT CGGTGGGCGA TCTCGAGGGG AAGGCGACAC TTTCTGCTAT CAGTGGTGAT
GGAGCGGTGC TTCCATTGGA TGGCGATATC CGTGTAAAAA ACTTTGAGAT GCCCGCCAGT
CTGACGCTTG GCCTCGCTCA TCAGTTCAAT GAGCGTTGGG TAGTTGCTGC TGATATCAAG
CGTGCCTACT GGGGTGATGT AATGGATAGC ATGAATGTGG CTTTCATCTC GCAGTTGGGC
GGGATCGATG TCGCATTGCC ACACCGCTAT CAGGATATAA CGGTGGCCTC AATCGGCACT
GCTTACAAAT ATAACAATGA TTTAACGCTT CGTGCTGGAT ATAGCTATGC ACAACAGGCG
CTAGACAGCG AACTGATATT GCCAGTGATT CCTGCTTATT TGAAGCGGCA CGTTACTTTC
GGTGGCGAGT ATGACTTTGA CAAGGACTCC AGGATCAATT TGGCAATTTC TTTTGGCCTG
AGAGAGCGCG TGCAGACGCC ATCGTACTTG GCAGGCACCG AGATGTTGCG GCAAAGCCAC
AGTCAAATAA ATGCAGTGGT TTCCTATAGC AAAAATTTTT AA
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| Protein sequence | MKIASVLALP LSGYAFSVHA TQVFDLEGYG AISRAMGGTS SSYYTGNAAL ISNPATLSFA
PDGNQFELGL DVVTTDIKVH DSHGAEAKSS TRSNNRGPYV GPQLSYVAQL DDWRFGAGLF
VSSGLGTEYG SKSFLSQTEN GIQTSFDNSS RLIVLRAPIG FSYQATSKLT FGASVDLVWT
SLNLELLLPS SQVGALTAQG NLSGGLVPSL AGFVGTGGAA HFSLSRNSTA GGAVDAVGWG
GRLGLTYKLT DNTVLGAMYN FKTSVGDLEG KATLSAISGD GAVLPLDGDI RVKNFEMPAS
LTLGLAHQFN ERWVVAADIK RAYWGDVMDS MNVAFISQLG GIDVALPHRY QDITVASIGT
AYKYNNDLTL RAGYSYAQQA LDSELILPVI PAYLKRHVTF GGEYDFDKDS RINLAISFGL
RERVQTPSYL AGTEMLRQSH SQINAVVSYS KNF
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