| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2877 |
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| Symbol | |
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| ID | 5193759 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 3268675 |
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| End bp | 3269502 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640587326 |
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| Product | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase |
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| Protein accession | YP_001268192 |
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| Protein GI | 148548090 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | [TIGR03325] cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.171693 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0210668 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGACTTG AAGGCGAAGT GGCCTTGGTG ACAGGCGGTG GCGCAGGCCT GGGCAGAGCG
ATCGTGGATC GTTATGTCGC GGAAGGTGCG CGTGTCGCGG TGCTGGATAA ATCCGCGGCA
GGCCTGGAAG CGCTCAGGAA ACTCCATGGC GATGCAATCG TGGGCGTGGA GGGGGATGTT
CGCTCGCTCG ACAGCCATCG TGAGGCTGTG GCCCGCTGCG TCGAAGCGTT CGGCAAGCTG
GACTGCCTGG TTGGCAATGC TGGCGTTTGG GACTACCTGA CCCAACTGGT GGATATTCCC
GACGACCTCA TATCGGAGGC ATTCGAGGAA ATGTTCGAGG TCAATGTCAA GGGCTACATC
CTGGCGGCAA AGGCTGCGCT ACCTGCGCTT TATCAGAGCA AAGGCAGCGC GATATTCACT
GTGTCGAATG CCGGTTTCTA CCCGGGCGGT GGCGGTGTTC TGTATACAGC TGGCAAACAT
GCCGTGATTG GATTGATCAA GCAGCTCGCG CACGAATGGG GGCCGCGTAT CCGCGTCAAC
GGCATCGCCC CCGGTGGCAT TTTGGGGAGC GATCTGCGCG GGCTGAAGAG CCTTGATTTA
CAAGACAAGA GCATTTCGAC CTTTCCATTG GACGACATGC TGAAATCCGT TCTTCCGACC
GGGCGGGCCG CCACTGCCGA GGAATACGCC GGCGCCTATG TCTTCTTCGC GACGCGCGGC
GACACGGTTC CGCTCACCGG TAGCGTGTTG AACTTCGATG GCGGCATGGG CGTGCGTGGC
TTGTTCGAAG CCAGCCTAGG CGCACAGCTC GACAAGCACT TCGGTTGA
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| Protein sequence | MRLEGEVALV TGGGAGLGRA IVDRYVAEGA RVAVLDKSAA GLEALRKLHG DAIVGVEGDV
RSLDSHREAV ARCVEAFGKL DCLVGNAGVW DYLTQLVDIP DDLISEAFEE MFEVNVKGYI
LAAKAALPAL YQSKGSAIFT VSNAGFYPGG GGVLYTAGKH AVIGLIKQLA HEWGPRIRVN
GIAPGGILGS DLRGLKSLDL QDKSISTFPL DDMLKSVLPT GRAATAEEYA GAYVFFATRG
DTVPLTGSVL NFDGGMGVRG LFEASLGAQL DKHFG
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