| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2869 |
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| Symbol | |
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| ID | 5194760 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 3259135 |
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| End bp | 3260577 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640587318 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_001268184 |
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| Protein GI | 148548082 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.451085 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.401715 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACTC ACTATCTTTC GATCGCACTG AGCGTAGCGC TAAGCGGCTG TAGTCTCATC
CCTGACTACC AGCGCCCGCC TGCCCCCATC CAAGCCGGCT GGCCCCAGGG CGAAGCCTAC
GCCAAGCTCA AGGCAGGTAC TCATCGTCCC TCTCAGACGC GCGATGCAGA GCTGAATTGG
CAAGTATTCT TTCGCGATCC AGTCATGCGC GAACTGATCG CCACAGCCCT GAACAACAAC
CGTGACCTGC GCCAGACCGC ACTCAACGTC GAGGCCTACC GCGCCCTGCA CAGGATCGAG
CGGTCTGCTC TGCTCCCGAG GGCCAATACC GGTGTTGGCG CTACGCGCCA GCGCTTGCCC
GCCGATCTAT CCCCCACAGG TGAGGCCGGT ATCCAGAGTC AGTACGATAC GACGCTGAGC
ATGTCCTACG AGCTGGATAT GTTCGGTCGC CTGCGCAGCC TTGAACGTGC GGCATTGCAA
GAATACCTAG CCGCCGCCGA AACCCAGCGC AGCATGCAGA TCGCGTTGAT CGCAGATGTC
GCCATCGCCT ATCTGAGCTG GCGCAGCGAC CAGGCTCAAC TCGATCTGGC GCGCTCGACG
CTCGCCAGCT ACGAGAACAG CCTGAACCTG ATCAAGTCGA GTCGCGAGGT CGGTACTGCC
TCGGCACTCG ATGTACGCCA GGCACGCAGC CTTGTGGAAA CCGCACGCGT GCAACAGACG
CTGTATACCC GCCAGGTCGC GCAGGACATG AATGCCCTGC AATTGCTGCT CGGTACCAAG
CTGCCGGCCG ACTTGCCAAT CAGCGACGTC CTCGACCAAC CGCTGGCCGC ACTCTCCACC
GGCCTTCCGG CCGATCTGCT GTTGCACCGT CCAGACATCC GCGCTGCCGA ACACCGACTG
CTAGCCGCCA ACGCCAATAT CGGCGCGGCG CGGGCGGCCT TTTTCCCTAG CATCACGCTG
ACCGCAGCGG CTGGCACGGC CAGCCATGAA TTGGATGGTT TGTTCGAGGG AGGCTCGGGG
CTGTGGGCCT TCATGCCGCG GATCAATCTG CCGATCTTCA CCGCAGGGCG CCTGCGCGGC
AACCTCGACT ACCGCAATGT CATCAAGGAC ATCAACGTAG CCGAGTACGA GAAAAGCATC
CAGACCGCCT TCCGCGAGGT AGCCGATGGC CTGGCAGCGC GCGGCACTTT TGGCGAACAA
CTGCAGGCCC AGCGCGACTT GGTCGATAAC AACCAAGCTT ACTACAAATT GGCCTATCAA
CGCTACGACG AGGGCGTGGA CAATTATCTG GCGGTGCTCG ATGCACAGCG TGAGCTGTTC
GCCGCACAAC AACAGTTCCT TTCGGACCGC CTCAATCAGC TCAGCAGCGA GGTGAGACTG
TTCAAGGCCC TGGGTGGTGG CTGGGATAAC ATTTCCTCCC AGCCACTTAC CGCTCAGAAC
TGA
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| Protein sequence | MKTHYLSIAL SVALSGCSLI PDYQRPPAPI QAGWPQGEAY AKLKAGTHRP SQTRDAELNW
QVFFRDPVMR ELIATALNNN RDLRQTALNV EAYRALHRIE RSALLPRANT GVGATRQRLP
ADLSPTGEAG IQSQYDTTLS MSYELDMFGR LRSLERAALQ EYLAAAETQR SMQIALIADV
AIAYLSWRSD QAQLDLARST LASYENSLNL IKSSREVGTA SALDVRQARS LVETARVQQT
LYTRQVAQDM NALQLLLGTK LPADLPISDV LDQPLAALST GLPADLLLHR PDIRAAEHRL
LAANANIGAA RAAFFPSITL TAAAGTASHE LDGLFEGGSG LWAFMPRINL PIFTAGRLRG
NLDYRNVIKD INVAEYEKSI QTAFREVADG LAARGTFGEQ LQAQRDLVDN NQAYYKLAYQ
RYDEGVDNYL AVLDAQRELF AAQQQFLSDR LNQLSSEVRL FKALGGGWDN ISSQPLTAQN
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