| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2866 |
|---|
| Symbol | |
|---|
| ID | 5194251 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 3253810 |
|---|
| End bp | 3254592 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640587315 |
|---|
| Product | regulatory protein, IclR |
|---|
| Protein accession | YP_001268181 |
|---|
| Protein GI | 148548079 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1414] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGATT CGGAAGAAAG CAGCGCCAGG CATGGCGGTA TACAGGTCAT CGCGCGGGCT
GCATCGATCA TGCGGGCTTT GGGAAGTCAT CCGCAGGGCT TGAGTCTTGC GGCCATCGCT
CAGGTCGTCG ATCTGCCGCG CTCGACGGTA CAACGCATTA TCAATGCGTT GGGCGCGGAG
CACCTTGTGG AGGCTCTGGG GCCCAGTGGA GGGTTTCGTC TTGGGCCGGC ATTCGGGCGG
CTCATCACTC AGGCGCAGAC GGACATCATC TCCCTGGTCA GGCCTCACCT GATTGCGCTT
TCGGAGCAGG TGTATGAGTC GACTTGCCTG TTGTCTCTGT CTGGCGAAAA AATTTATGTG
CTGGATCGTG TTGTTGCTGA ACGAGAACTA CGCGTCGTCT TTCCCATTGG TATTCATGTC
CCGGCGACCG CCGTTTCCGG CGGCAAGGTA TTACTGGCCG AATTGTCGGA AGAAGCGCAA
CAAGCTTTGT TGCCCGATCC TCTACCTGTG TGTACGCCCA GAAGCGTGGC GCGGGAGGCC
TTGCTTGAAC AATTGAAGAC GATCAAGTCC GGTGGTGTGG CGGACGACCA TGACGAATAC
ATCGAAGGGC TGTGCTCCTA CTCCGTGCTA TTGGACACAT ATCTTGGGCA TTACTCGGTA
TCCATTGTGG CCCCCAATTC ACGAGCAACC ACTAGGGTGG CGGAATTCCA GCAGGCGCTT
CAGGCATGCA AGCAGAATAT TGAGGTGACG ATTGGTCGAG CGCCTCGGGA GTTTGCGGGT
TGA
|
|---|
| Protein sequence | MSDSEESSAR HGGIQVIARA ASIMRALGSH PQGLSLAAIA QVVDLPRSTV QRIINALGAE
HLVEALGPSG GFRLGPAFGR LITQAQTDII SLVRPHLIAL SEQVYESTCL LSLSGEKIYV
LDRVVAEREL RVVFPIGIHV PATAVSGGKV LLAELSEEAQ QALLPDPLPV CTPRSVAREA
LLEQLKTIKS GGVADDHDEY IEGLCSYSVL LDTYLGHYSV SIVAPNSRAT TRVAEFQQAL
QACKQNIEVT IGRAPREFAG
|
|---|
| |