| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2852 |
|---|
| Symbol | |
|---|
| ID | 5193999 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 3235592 |
|---|
| End bp | 3236908 |
|---|
| Gene Length | 1317 bp |
|---|
| Protein Length | 438 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640587302 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_001268168 |
|---|
| Protein GI | 148548066 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2271] Sugar phosphate permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.437146 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCCAA TGAAGAAGTA CCAGCGCATT ACCGTCGTGT TCCTGCTGCT GATCGGCATC
GTCAACTACC TGGACCGTAG TGCGCTGTCG ATCGCCAACA CCTCCATCCA GAAAGACATG
ATGATCAGCC CGTCGCAGAT GGGCATCCTG TTGTCGGCGT TTTCCATTGC CTATGCCTTT
GCCCAGTTGC CAATGGGCAT GATCATCGAC CGCCTGGGCA GCAAGATCGC CCTCGGCGCT
TCGTTGCTGG GCTGGTCGGT TGCCCAGGCG GCGTTTGGCA TGGTCAACAG TTTTGCCGGT
TTCATGGGCC TGCGGGTGTT GCTGGGGATT GGCGAGGCGC CGATGTTTCC ATCGGCGGCC
AAAGCATTGT CGGAGTGGTT CGACGCCAAC GAGCGCGGCA CCCCGACCGG TGTGGTCTGG
TCGTCGACCT GTCTTGGCCC CTGCCTGGCG CCGCCGTTGC TGACGCTGTT CATGGTCAAC
TTTGGCTGGC GCGGCATGTT CATCATTACC GGCGTGATCG GCGTGGTACT GGCGCTGTGC
TGGCTGACCT TCTACAAGAG CAAGGCCCGT TTTCTGGCAG AGCTTGCCGC CGAAGGCAAA
CCGCTGCCGA GTGAGCGCCA GGCTGCGGCC GCCACGGTAA CCGCGCCGAA GGCTTCGTAC
TTTGCCGGCT GGCTTGATCT GTTCAAGCAC CGCAGTACCT GGGGCGCGGT GTTGGGTTTC
ATGGGGGTGA TCTACATGCT CTGGCTGCAC CTGACCTGGC TGCCGGGCTA CTTCGAGCGC
GAGCATGGCC TGGACCTGTA CAAGACCGCC TGGGTGGTGT CGCTGGCGTA TGGCTTCGGT
GCGGCGGGTA CCATCATTGC CGGGCGCTTC TGTGACTGGC TGGTAAGGCG TGGCATGAGC
GTGCTGGGCA GCCGCAAGTT CAGTGTCATC ACTGGCCTGG TGCTGGCAGC GCTGTTCACC
TTGCCACTGT CGTTCGTCAC CGGCCTAACG GGGTGCATCA TGCTGCTTTG CCTGGCGCTG
TTCAGCATCA ATATGGCCAG TGCCACCGCT TGGATGATCG TCAACACCAT TGTCGACAGC
CAGCGCGTGG CCTCGTTTGG CTCGATCCAG AACTTCGGCG GTTACATCGC AGGCTCGGTG
GCACCGATCG TGACGGGCTT CAGCATCCAG TACTCGGGCT CGTTCACCAC AGCGTTCATG
ATCAGCGCGG TGGTGGCGCT GTGCTCGGCG GTGGCGTATT TCCTGCTGCT TCAGGCGCCC
ATTGGCAGTG CCAGGGTCGA GGCGGGCGGG ATGGCTGGCG CAACTGAACA GGCGTGA
|
|---|
| Protein sequence | MNPMKKYQRI TVVFLLLIGI VNYLDRSALS IANTSIQKDM MISPSQMGIL LSAFSIAYAF
AQLPMGMIID RLGSKIALGA SLLGWSVAQA AFGMVNSFAG FMGLRVLLGI GEAPMFPSAA
KALSEWFDAN ERGTPTGVVW SSTCLGPCLA PPLLTLFMVN FGWRGMFIIT GVIGVVLALC
WLTFYKSKAR FLAELAAEGK PLPSERQAAA ATVTAPKASY FAGWLDLFKH RSTWGAVLGF
MGVIYMLWLH LTWLPGYFER EHGLDLYKTA WVVSLAYGFG AAGTIIAGRF CDWLVRRGMS
VLGSRKFSVI TGLVLAALFT LPLSFVTGLT GCIMLLCLAL FSINMASATA WMIVNTIVDS
QRVASFGSIQ NFGGYIAGSV APIVTGFSIQ YSGSFTTAFM ISAVVALCSA VAYFLLLQAP
IGSARVEAGG MAGATEQA
|
|---|
| |