| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2842 |
|---|
| Symbol | |
|---|
| ID | 5192961 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 3224614 |
|---|
| End bp | 3225159 |
|---|
| Gene Length | 546 bp |
|---|
| Protein Length | 181 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640587292 |
|---|
| Product | HupE/UreJ protein |
|---|
| Protein accession | YP_001268158 |
|---|
| Protein GI | 148548056 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG2370] Hydrogenase/urease accessory protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.616915 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGA CTTTCGCCCT GTTTCTGTTG ATGCTGGCAC TGCCAGCCTT CGCCCATCCG
GGCCATGACA GCAACCCGCT GCAGGACGGC CTGCTGCACC CGCTGACCGG GCTCGATCAC
CTGCTGATGC TGCTGGGTAC CGGCGTGCTC GCCGCGTTGA CCCGTCGCAA CCTGACATTG
CCCCTGGCTA CCCTGGCGGC CATGTTCGGT GGTGCCGTGT GCGGTCACCT GTTCGGCGAT
GTGCTGGGCA TGGAAACCCT GATTGCCGTG TCGCTGCTGG TGGCTGCCGG GGCGGTGCTG
CTGCCGAGCC GCCAGTCGCT GCTGGCCATG GCCATGCCGG TGTTCGCCTT GTTCCATGGT
TGGGCACATG GCGTAGAAGC CACGCCGAGC GCGTTCTGGC AATTCAGCGC GGGGTTTGTC
GTGGTCAGCG GCTTGCTGCT GGCGGCGGGC TTTGCAGTCG GTTGCCTGCT GCGCCGCCAC
AGCGGCCTGC AGAAGGCCTT TGGCGGTGGC CTGTTGGCCG GCGCCGCGCT GGTGCTGGCC
GGTTGA
|
|---|
| Protein sequence | MKKTFALFLL MLALPAFAHP GHDSNPLQDG LLHPLTGLDH LLMLLGTGVL AALTRRNLTL
PLATLAAMFG GAVCGHLFGD VLGMETLIAV SLLVAAGAVL LPSRQSLLAM AMPVFALFHG
WAHGVEATPS AFWQFSAGFV VVSGLLLAAG FAVGCLLRRH SGLQKAFGGG LLAGAALVLA
G
|
|---|
| |