Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_2839 |
Symbol | |
ID | 5191733 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 3220568 |
End bp | 3223036 |
Gene Length | 2469 bp |
Protein Length | 822 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640587289 |
Product | phosphatidylinositol-specific phospholipase C, X region |
Protein accession | YP_001268155 |
Protein GI | 148548053 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGAAC TGGCGAGCGA CGAATTCGAA GAGATCAGTT TTATCAGTCC CTCCGGGGAC GTGCTCATCC GTGTCTACAC CCCTAAGCAA TGTACAGACC CGGTAGACTG GGGCGAATTC GAAGAAATTG AACGTCCGGC CATGCTTGTC AGGCCTGGTA TGTTTGACAT GGAGGTAGTG ACACTTACCA ACCCTGATGG CCGTTGGAGG CGAAGGATTG GAACGGTCAG ACCCACAATG AACGCAGCAC CCTCCGCAGC TAGTGAAAGT GCTCCGTTGA GCGATACCAA TTCACCCTTC GTGAAGCACA GTCTGCAGAC TGACGGTCAG TCAGAAGTAC AATACGCCGA TGGTTGGGAG ATTTTATATC ACGACGGGTC AGGTGTCAGG TTCAGTCTGT ACGCTGATGG TTTTACAGGT GATCTTTCGG ACTATGAATT CGCTCTTCCC TATTGGATTA GGGATGCTGA GGAAAGAATT GTCCACGGGG CTTGTAATTT TGAACAGTTG AGTACGCTTG GCGCGACCTG GGCATTTCGT CCTTTGGTAC TGCTCGCCGG GAAAAAGGCG CGAGCCGAGG CAGTTCAACC GCAGGCAGAC GTGGAGCAGA CGTATCACGA TAACAAGGTG CATTTCCGGT CCAAATATGG CCAACCCTTT GGAACGGCTA ACGAGATTGT TTATGGCTCC TACGAAATTA CGTCGGCGAA GGTTTCCAGT GGCCAAGATC CTGATAACTA TATCGACCCA CCGTTTACAA GAAGTTTCTC CAGCAATGGA ACTATGAGCT TCAAGGTGGG GCGGCACGGT ACGGACGCTG TCGCGAACTG GTTCAGTAGC TACATCAGTG ATTCCGAGAA TACGTTCGGG CATGCTCCAG GTAAGCTCAA TTTTGGTTTC AAAGGCACGT TGAAACTGAC CGTGACGGGC GGTAGTTTCA GTGGCATGGA CCAAACGCTG GTATTCAAGG ACGTTTTCAT CGCTCAAGGT CATACAGGAA CATCAAATAA CTGGTGGTTC GGCGCCATTG GTGCCCGCAA CCCGGACGAT GGTAAGCGTT GGGTTCGAGT GGAGGGTAAG GCGCCGACGC CGTACGGGGA GTTTGATGCC TCGATGTATT TTCAGCGCGG CGGAGAGCCG CTCACGGACG ACGAAATATT CGTATACGAG GGATCGCTAA ATGCGCTGCC CACCGAGGCG TGGATGACCA GATTGATAGG TACGACTCGC GTGCAAGATA TGGTGCTTCC CGGCAGCCAT AACGCTGGCA TGTATGGCCC ACTGCATAAT TGCACCGGGG GAGGCTTTGG TGAGGCAGCA TCTAGAGCGC AACGCGCCTC CATTGCGGAG CAACTCCGGA TGGGTGTTCG TTACCTGGAT ATCCGGGTCG CTCGCGCTGA TGGTCAACTG CTTTGTTACC ATCGGACAGG CACCGGCACG GGGCCGGGAT GCGACGGCGC GACGCTCGAC GAAGTACTCA CTTCCGTTGA CACGTTCTTG ACAGAAAATC GCGGAGAGTT CGTGATCTTG AGCTTCACGC ATATACCCGA CGCTGACGTT TCAGCCATTC AAACGATGAT TAATCGCCAT GCGAATCGTC TGCACAAAGT CAGTGCCGAA CCGGGTGAGC GCAAACCGGT GAACCAATTT ATCCTGGAGG ATTTGCGCGG GAAAATGCTG GTGGTCAGTG AAGGGTTGAT GGATGCGCCT GACTCAGGGT TTTATAGAAA AACAAAGGGT CCAAATTCTT GGGATGCGTA TCAAATTGTG GATGACTACG CTAATTCGAA AGACACAGAT GCTGTGATTG AAGATCAGTT GGGTAAGTGG GCAAGGCATG TGCCGGGTGA ATATGGCGTC GGCTTCATGC TCAACTGGAC TCGCACCCCG CAGAGCGGGG CGGATTCGGT CGAAAAAATG GCGAAAGTCA TCAATGAAAA ACTGGCACAC AATCTTAATA GCTACCCGGC TAACTGGAGT GCCCCGCAGG TGGTATTGCT GGATTTTGTG ACGCCGGGGT ATGTCAACTC CATTGTCAAT CAAAACCTCG CAAATATTTC ACGGCGCGAC GAAGGCGATG AAGTGGAACC ACCCGTTGGG GCGCGAGTCA ACGTGAATAT GTATCCACTG CCATTATTTG ACGGTGACCC GGTCCGCAAA AAACTACCTT TCGGTTCGTT GATTCCACTC TGGAGGGAAA CCGCCATCAG CAACGAGGGC GGAAGCGTGC GTTTCGCGGC GCGGCCGTAC AATCGTAACA GGTTGATTAC CTTTGGCGGG TTGGGGTTGC TGTGCTTCAG GCAATACATC ATCTCTAAAG ACTTTGAAGG TGATGGCTTT GAGGTGCCGT TGCTGTCGGA TGTACCTACT AGTCTACCCA AAGGCGTCCG GGAGATACGA TGGATAGGCA CCAATGCCAA AATAAGATGG TTGCATCTGC TTCAATACGG CAAAGTGGAC GCTGAATAA
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Protein sequence | MTELASDEFE EISFISPSGD VLIRVYTPKQ CTDPVDWGEF EEIERPAMLV RPGMFDMEVV TLTNPDGRWR RRIGTVRPTM NAAPSAASES APLSDTNSPF VKHSLQTDGQ SEVQYADGWE ILYHDGSGVR FSLYADGFTG DLSDYEFALP YWIRDAEERI VHGACNFEQL STLGATWAFR PLVLLAGKKA RAEAVQPQAD VEQTYHDNKV HFRSKYGQPF GTANEIVYGS YEITSAKVSS GQDPDNYIDP PFTRSFSSNG TMSFKVGRHG TDAVANWFSS YISDSENTFG HAPGKLNFGF KGTLKLTVTG GSFSGMDQTL VFKDVFIAQG HTGTSNNWWF GAIGARNPDD GKRWVRVEGK APTPYGEFDA SMYFQRGGEP LTDDEIFVYE GSLNALPTEA WMTRLIGTTR VQDMVLPGSH NAGMYGPLHN CTGGGFGEAA SRAQRASIAE QLRMGVRYLD IRVARADGQL LCYHRTGTGT GPGCDGATLD EVLTSVDTFL TENRGEFVIL SFTHIPDADV SAIQTMINRH ANRLHKVSAE PGERKPVNQF ILEDLRGKML VVSEGLMDAP DSGFYRKTKG PNSWDAYQIV DDYANSKDTD AVIEDQLGKW ARHVPGEYGV GFMLNWTRTP QSGADSVEKM AKVINEKLAH NLNSYPANWS APQVVLLDFV TPGYVNSIVN QNLANISRRD EGDEVEPPVG ARVNVNMYPL PLFDGDPVRK KLPFGSLIPL WRETAISNEG GSVRFAARPY NRNRLITFGG LGLLCFRQYI ISKDFEGDGF EVPLLSDVPT SLPKGVREIR WIGTNAKIRW LHLLQYGKVD AE
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