Gene Pput_2839 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_2839 
Symbol 
ID5191733 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3220568 
End bp3223036 
Gene Length2469 bp 
Protein Length822 aa 
Translation table11 
GC content53% 
IMG OID640587289 
Productphosphatidylinositol-specific phospholipase C, X region 
Protein accessionYP_001268155 
Protein GI148548053 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGAAC TGGCGAGCGA CGAATTCGAA GAGATCAGTT TTATCAGTCC CTCCGGGGAC 
GTGCTCATCC GTGTCTACAC CCCTAAGCAA TGTACAGACC CGGTAGACTG GGGCGAATTC
GAAGAAATTG AACGTCCGGC CATGCTTGTC AGGCCTGGTA TGTTTGACAT GGAGGTAGTG
ACACTTACCA ACCCTGATGG CCGTTGGAGG CGAAGGATTG GAACGGTCAG ACCCACAATG
AACGCAGCAC CCTCCGCAGC TAGTGAAAGT GCTCCGTTGA GCGATACCAA TTCACCCTTC
GTGAAGCACA GTCTGCAGAC TGACGGTCAG TCAGAAGTAC AATACGCCGA TGGTTGGGAG
ATTTTATATC ACGACGGGTC AGGTGTCAGG TTCAGTCTGT ACGCTGATGG TTTTACAGGT
GATCTTTCGG ACTATGAATT CGCTCTTCCC TATTGGATTA GGGATGCTGA GGAAAGAATT
GTCCACGGGG CTTGTAATTT TGAACAGTTG AGTACGCTTG GCGCGACCTG GGCATTTCGT
CCTTTGGTAC TGCTCGCCGG GAAAAAGGCG CGAGCCGAGG CAGTTCAACC GCAGGCAGAC
GTGGAGCAGA CGTATCACGA TAACAAGGTG CATTTCCGGT CCAAATATGG CCAACCCTTT
GGAACGGCTA ACGAGATTGT TTATGGCTCC TACGAAATTA CGTCGGCGAA GGTTTCCAGT
GGCCAAGATC CTGATAACTA TATCGACCCA CCGTTTACAA GAAGTTTCTC CAGCAATGGA
ACTATGAGCT TCAAGGTGGG GCGGCACGGT ACGGACGCTG TCGCGAACTG GTTCAGTAGC
TACATCAGTG ATTCCGAGAA TACGTTCGGG CATGCTCCAG GTAAGCTCAA TTTTGGTTTC
AAAGGCACGT TGAAACTGAC CGTGACGGGC GGTAGTTTCA GTGGCATGGA CCAAACGCTG
GTATTCAAGG ACGTTTTCAT CGCTCAAGGT CATACAGGAA CATCAAATAA CTGGTGGTTC
GGCGCCATTG GTGCCCGCAA CCCGGACGAT GGTAAGCGTT GGGTTCGAGT GGAGGGTAAG
GCGCCGACGC CGTACGGGGA GTTTGATGCC TCGATGTATT TTCAGCGCGG CGGAGAGCCG
CTCACGGACG ACGAAATATT CGTATACGAG GGATCGCTAA ATGCGCTGCC CACCGAGGCG
TGGATGACCA GATTGATAGG TACGACTCGC GTGCAAGATA TGGTGCTTCC CGGCAGCCAT
AACGCTGGCA TGTATGGCCC ACTGCATAAT TGCACCGGGG GAGGCTTTGG TGAGGCAGCA
TCTAGAGCGC AACGCGCCTC CATTGCGGAG CAACTCCGGA TGGGTGTTCG TTACCTGGAT
ATCCGGGTCG CTCGCGCTGA TGGTCAACTG CTTTGTTACC ATCGGACAGG CACCGGCACG
GGGCCGGGAT GCGACGGCGC GACGCTCGAC GAAGTACTCA CTTCCGTTGA CACGTTCTTG
ACAGAAAATC GCGGAGAGTT CGTGATCTTG AGCTTCACGC ATATACCCGA CGCTGACGTT
TCAGCCATTC AAACGATGAT TAATCGCCAT GCGAATCGTC TGCACAAAGT CAGTGCCGAA
CCGGGTGAGC GCAAACCGGT GAACCAATTT ATCCTGGAGG ATTTGCGCGG GAAAATGCTG
GTGGTCAGTG AAGGGTTGAT GGATGCGCCT GACTCAGGGT TTTATAGAAA AACAAAGGGT
CCAAATTCTT GGGATGCGTA TCAAATTGTG GATGACTACG CTAATTCGAA AGACACAGAT
GCTGTGATTG AAGATCAGTT GGGTAAGTGG GCAAGGCATG TGCCGGGTGA ATATGGCGTC
GGCTTCATGC TCAACTGGAC TCGCACCCCG CAGAGCGGGG CGGATTCGGT CGAAAAAATG
GCGAAAGTCA TCAATGAAAA ACTGGCACAC AATCTTAATA GCTACCCGGC TAACTGGAGT
GCCCCGCAGG TGGTATTGCT GGATTTTGTG ACGCCGGGGT ATGTCAACTC CATTGTCAAT
CAAAACCTCG CAAATATTTC ACGGCGCGAC GAAGGCGATG AAGTGGAACC ACCCGTTGGG
GCGCGAGTCA ACGTGAATAT GTATCCACTG CCATTATTTG ACGGTGACCC GGTCCGCAAA
AAACTACCTT TCGGTTCGTT GATTCCACTC TGGAGGGAAA CCGCCATCAG CAACGAGGGC
GGAAGCGTGC GTTTCGCGGC GCGGCCGTAC AATCGTAACA GGTTGATTAC CTTTGGCGGG
TTGGGGTTGC TGTGCTTCAG GCAATACATC ATCTCTAAAG ACTTTGAAGG TGATGGCTTT
GAGGTGCCGT TGCTGTCGGA TGTACCTACT AGTCTACCCA AAGGCGTCCG GGAGATACGA
TGGATAGGCA CCAATGCCAA AATAAGATGG TTGCATCTGC TTCAATACGG CAAAGTGGAC
GCTGAATAA
 
Protein sequence
MTELASDEFE EISFISPSGD VLIRVYTPKQ CTDPVDWGEF EEIERPAMLV RPGMFDMEVV 
TLTNPDGRWR RRIGTVRPTM NAAPSAASES APLSDTNSPF VKHSLQTDGQ SEVQYADGWE
ILYHDGSGVR FSLYADGFTG DLSDYEFALP YWIRDAEERI VHGACNFEQL STLGATWAFR
PLVLLAGKKA RAEAVQPQAD VEQTYHDNKV HFRSKYGQPF GTANEIVYGS YEITSAKVSS
GQDPDNYIDP PFTRSFSSNG TMSFKVGRHG TDAVANWFSS YISDSENTFG HAPGKLNFGF
KGTLKLTVTG GSFSGMDQTL VFKDVFIAQG HTGTSNNWWF GAIGARNPDD GKRWVRVEGK
APTPYGEFDA SMYFQRGGEP LTDDEIFVYE GSLNALPTEA WMTRLIGTTR VQDMVLPGSH
NAGMYGPLHN CTGGGFGEAA SRAQRASIAE QLRMGVRYLD IRVARADGQL LCYHRTGTGT
GPGCDGATLD EVLTSVDTFL TENRGEFVIL SFTHIPDADV SAIQTMINRH ANRLHKVSAE
PGERKPVNQF ILEDLRGKML VVSEGLMDAP DSGFYRKTKG PNSWDAYQIV DDYANSKDTD
AVIEDQLGKW ARHVPGEYGV GFMLNWTRTP QSGADSVEKM AKVINEKLAH NLNSYPANWS
APQVVLLDFV TPGYVNSIVN QNLANISRRD EGDEVEPPVG ARVNVNMYPL PLFDGDPVRK
KLPFGSLIPL WRETAISNEG GSVRFAARPY NRNRLITFGG LGLLCFRQYI ISKDFEGDGF
EVPLLSDVPT SLPKGVREIR WIGTNAKIRW LHLLQYGKVD AE