| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2836 |
|---|
| Symbol | |
|---|
| ID | 5193985 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 3215688 |
|---|
| End bp | 3216968 |
|---|
| Gene Length | 1281 bp |
|---|
| Protein Length | 426 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640587286 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001268152 |
|---|
| Protein GI | 148548050 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACCGAT CTTTTACGCT CAGAGCTTTT GTGTGCTTGA CTACCTTGGC CCCCGCCACC
GCACTTTACG CAGCCGCCGA CCCACAAGTC GAAGCGCTGA AACAGGAACT GATTGAACTC
AAACGCCGCT ATGAGGCACA GCAACAGGCG CTGATGGTGC TGGAGCAACG TGTGCGCCAG
GTCGAGGAGG CCCCTGCTGC CGCGCAACCC AAACGCTTGG TCAAGTCTCC GGCCGAAGGG
GTGAAAGGTG CGCAGACCGT CGCCTCTGGC GCACCGGGCA CTACGGGGAG CTCCTACGGC
CAGGCGCTGA CAGCCGATTC CGAGCCGGCG CAAAGCGTTT CCAACCTGTA TGACGAAGCC
AGCGGATTCT TTGGCGGGGG CAAGTTCAGC TTCGAAACCG GCGTTACCTA TACCCATTAC
GATACCCGTG CGCTGACCCT CAATGGCTTT CTGGCACTGG ACTCGATCTT CCTCGGCAGC
ATCAACCTTG ACCGGATCAA GGCTGACAAC TGGACCCTGG ACATGACCGC GCGCTACAAC
CTGGCGCAGC GCTGGCAGTT CGATATCAAC GTCCCCGTGG TTTACCGCGA GTCCACCTAC
TCGTCTGGCG GTGCGGGGGG AGCCGGGGCA ACCACTTCCG ATGCCAGCGT GACCCGCGAC
CCGGAAATCG GCGATATCAA CGTCGGGGTG GCCTACAAGT TCCTCGACGA GGACGAAACC
TGGCCTGACG CAGTGGCCAC CCTGCGAATC AAGGCACCGA CCGGCAAAGA CCCCTATGGC
ATCAAACTGC GCGAGGTGGA CGGCAACAAC AACCTCGCAG TACCGGAAAG CCTACCGACC
GGCAACGGTG TATGGTCGAT CACACCGGGC ATCTCGCTGG TCAAGACCTT CGACCCGGCC
GTGCTGTTCG GCAGCCTGTC CTACACCTAC AACATGCAAG ACTCGTTCAG CGACATCAGT
CCGCAGGTGA ACAGCAAGGT GCCGGGTGAC GTCAAGCTTG GCGACTCGTG GCAGATCGGC
GGTGGCATCG CCTTTGCCCT TAACGAAAAG ATGAGTATGT CGTTCTCGGT ATCCGACCAG
TTCGCCCGCA AGAGCAAGAT CAAACCTGAT GGCGGCGACT GGCAATCGAT CTCCAACAGT
GACTACAACG CCGCCAACTT CAACATCGGC CTGACCTTCG CCGCCACCGA CAACCTGACC
ATCGTGCCCA ACCTGTCCAT TGGTCTGACC GATGACGCAC CTGACTTTTC TTTCAGCCTG
AAATTCCCTT ATTACTTCTG A
|
|---|
| Protein sequence | MYRSFTLRAF VCLTTLAPAT ALYAAADPQV EALKQELIEL KRRYEAQQQA LMVLEQRVRQ
VEEAPAAAQP KRLVKSPAEG VKGAQTVASG APGTTGSSYG QALTADSEPA QSVSNLYDEA
SGFFGGGKFS FETGVTYTHY DTRALTLNGF LALDSIFLGS INLDRIKADN WTLDMTARYN
LAQRWQFDIN VPVVYRESTY SSGGAGGAGA TTSDASVTRD PEIGDINVGV AYKFLDEDET
WPDAVATLRI KAPTGKDPYG IKLREVDGNN NLAVPESLPT GNGVWSITPG ISLVKTFDPA
VLFGSLSYTY NMQDSFSDIS PQVNSKVPGD VKLGDSWQIG GGIAFALNEK MSMSFSVSDQ
FARKSKIKPD GGDWQSISNS DYNAANFNIG LTFAATDNLT IVPNLSIGLT DDAPDFSFSL
KFPYYF
|
|---|
| |