| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2834 |
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| Symbol | |
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| ID | 5192429 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 3214163 |
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| End bp | 3214843 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640587284 |
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| Product | peptidase C39, bacteriocin processing |
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| Protein accession | YP_001268150 |
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| Protein GI | 148548048 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3271] Predicted double-glycine peptidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.222444 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTATTT TCGCCTTGGC GTTTTTGCTG TGCCTGGCCA GCGTGAGCGA AGCTGCACAA
ATGCCGCTGT CCGTCCTGCC GGGCGGCGCT GTGGTGTTCA AACCGATCCA GAGCTTGCGT
GAACGTAAGT TCGCCGACCT GGTGCAACAA AAGACCGACT TCAGCTGCGG CGCCGCCGCG
CTGGCGACCA TCCTGCGCCA GGCGTACTGG CTGGATGTGG ACGAACATCA GATCATCGAA
GGCATGCTGG CCCACGCCGA CCAGGACCTT GTGCGCACGC AAGGCTTCTC GATGCTCGAC
ATGAAGCGCT ACGTCGAAAG CCTCGGGATG CGTGCCCGCG GTTACCGGGT GGCACCTGAA
ACCCTGCACA GCGTACGCAT TCCTGTCGTG GTGCTGATGG ATGTGCGCGG CTACAAGCAC
TTCGTGGTCA TGCAGAAAGT CGACAAAGGT TGGGTGTACA TCGGTGATCC GGTGCTGGGC
CACAGGCGAT ACAAGGTCGA CGATTTCCTC AAGGGCTGGA ACGGCATCAT CTTCGCGGTG
ATCGGCCAGG GTTACGACAA GAACAACATC CTGCTCGACC CGCCCCTGCC ACTGACCGCC
AAGGGCCGGG TGAACAACTT CACCCCCGTG CAGGACGCAG AGCTGCTGGA CTTCGGCTTC
ATCAGAAGCG ACTTCTTCTA A
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| Protein sequence | MRIFALAFLL CLASVSEAAQ MPLSVLPGGA VVFKPIQSLR ERKFADLVQQ KTDFSCGAAA
LATILRQAYW LDVDEHQIIE GMLAHADQDL VRTQGFSMLD MKRYVESLGM RARGYRVAPE
TLHSVRIPVV VLMDVRGYKH FVVMQKVDKG WVYIGDPVLG HRRYKVDDFL KGWNGIIFAV
IGQGYDKNNI LLDPPLPLTA KGRVNNFTPV QDAELLDFGF IRSDFF
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