| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2830 |
|---|
| Symbol | |
|---|
| ID | 5192825 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 3210716 |
|---|
| End bp | 3211285 |
|---|
| Gene Length | 570 bp |
|---|
| Protein Length | 189 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640587280 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001268146 |
|---|
| Protein GI | 148548044 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG3172] Predicted ATPase/kinase involved in NAD metabolism |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0770617 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGCGC CACAAGCAAT GAAAGTGCTG GTACTGTGCG GCCCAGAATC CAGTGGCAAA
AGCTGGCTTA GCGGGGTGAT CCAGGCACAT TTTGGTGGCG TGGTGGTGGG CGAGTACGTG
CGCCATTTCA TCGACCAGCA ATGCCGTGAC ACCTGCTACG CCGATATTCC CGCCATCGCC
CGCGGGCAAC TGGCATGGGA GGACCGTGCG CGCGAGCTGG CGCCCCCACT GCTAATTCTG
GACACCCACC TGCTGAGCAA CATGCTCTGG AGCCAGGCAC TGTTCGACGA CTGCCCAACC
TGGCTGGAAG AGGCACTGCT GGCACGGCGT TACGACCTGC ACCTGTTGCT CAGCCCGCAA
GGGGTGGACT GGATTGCCGA TGGTCAGCGT TGCCAACCCG ATCTCAGCGA TCGTCAGCGC
TTTTTCGACG ACAGCCAGGC GTGGCTGAGG CGGCACAAAC AGCCGCACCA AATACTCGAT
GGCAATTGGC CGCAACGCCA ATTGCTGGCC TTGCAATCGG TTGCTATGCT GCTTGGTAGC
GATGCGCCAT CATGCCCAAC CGAGTGTTAA
|
|---|
| Protein sequence | MSAPQAMKVL VLCGPESSGK SWLSGVIQAH FGGVVVGEYV RHFIDQQCRD TCYADIPAIA
RGQLAWEDRA RELAPPLLIL DTHLLSNMLW SQALFDDCPT WLEEALLARR YDLHLLLSPQ
GVDWIADGQR CQPDLSDRQR FFDDSQAWLR RHKQPHQILD GNWPQRQLLA LQSVAMLLGS
DAPSCPTEC
|
|---|
| |