Gene Pput_2821 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_2821 
Symbol 
ID5193207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3202423 
End bp3203022 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content64% 
IMG OID640587271 
ProductXRE family transcriptional regulator 
Protein accessionYP_001268137 
Protein GI148548035 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCACC CCCCCCAGCC CCCCGCCAGC GAACCCGGGG GCGCCGCGCC GCAGTTCCTC 
GGCACCCGCA TCCGCGGCCT GCGCAAGCGC CGCGGCATGA CCTTGGCGGA GCTGGCCGCA
CACAGTGAAC TGACCGCAGG CTACATCAGC CAGCTGGAGC GCAACCTCTC CTACCCGTCG
ATCCCGGCGC TGTTCAATAT CGCCCGCAGC TTGGGCGTGA CCATCCAGTG GTTCTTCGCC
AGCGAAGCCA CCACCGCGCC CGAAGACCAA GGCTATGTGG TGCGGCGTAA CAGCCGCCTG
AGCGTGCATT ACGAAGATGG CATCGTTGAT CAACTGCTCA CTCCCCAGCC CAACCGCCAG
CTGGAGATGC TGCACTCACG TTTCCCGCCA GGTACTTACA GCCAGCAAAG CTACAGCCAC
GAAGGCGAAG AAGCCGGTTA CCTGCTCAGC GGCACGTTTG AGCTGTGGGT AGGCGAGCGG
CATTTCCAGC TGAGTGAAGG CGACAGCTTC AGCTTCTCGA GCCAGGAGCC CCATCGCTAC
GGCAACCCCG GTGAAGTGGA TGCCGTGGTG ATCTGGGTGA TCACGCCGCC AACCTTCTGA
 
Protein sequence
MSHPPQPPAS EPGGAAPQFL GTRIRGLRKR RGMTLAELAA HSELTAGYIS QLERNLSYPS 
IPALFNIARS LGVTIQWFFA SEATTAPEDQ GYVVRRNSRL SVHYEDGIVD QLLTPQPNRQ
LEMLHSRFPP GTYSQQSYSH EGEEAGYLLS GTFELWVGER HFQLSEGDSF SFSSQEPHRY
GNPGEVDAVV IWVITPPTF