Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_2812 |
Symbol | |
ID | 5190235 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 3193287 |
End bp | 3194288 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640587262 |
Product | bile acid:sodium symporter |
Protein accession | YP_001268128 |
Protein GI | 148548026 |
COG category | [R] General function prediction only |
COG ID | [COG0385] Predicted Na+-dependent transporter |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.885659 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.695799 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATACAG TGATGAAGTA TTTGCGCATG TTATTTGACA ATTTCACCTT GGCCTTGCTC GGTGTAGTAC TCATCGCCAC CGTGCTGCCT TGCGCGGGCG ATGGCGCGGT GTATTTCGGC TGGCTGACCA ACCTGGCCAT CGGCCTGTTG TTCTTCCTGC ATGGCGCCAA ACTGTCCCGT GAAGCCATCA TTGCCGGTGC CGGGCACTGG CGCCTGCACC TACTGGTGTT CTCCTGTACT TTCGTATTGT TCCCATTGCT GGGCCTGGCG TTCAAACCTC TGTTCGTACC GCTGGTGGGT AACGAGCTTT ACCTGGGCAT CCTGTACCTG TGTGCCTTGC CTGCAACCGT GCAGTCGGCC ATCGCCTTTA CCTCGCTGGC CCGCGGTAAC GTGCCGGCAG CCATCTGCAG CGCAGCGGCC TCCAGCCTGT TAGGTATCTT CCTCACCCCG TTGCTGGTGA TGCTGCTGCT GGGGGCCGGT GGTGATACAG GTTCCGGCCT GGATGCGGTG TTGAAGATCA CGTTGCAGCT GCTGGTGCCG TTCGTTGCCG GGCAGGTCGC GCGGCGCTGG ATCGGCGCCT GGGTCAAGCG CAATGCGCGC TGGCTCAAAG TGGTGGACCA GGGTTCGATC CTGCTGGTGG TGTACACCGC CTTCAGTGAG GCCGTGGTTA CCGGGCTGTG GCACACCGTA TCGCCGCAGC ACCTGGCGGG GTTGTTCGTA GTGTGCGCAA TTCTGCTGGC AGTGGTGCTG TTTGGCACCC GCTTGCTTGG CAAGGCGCTG GGCTTCGACC TCGAGGATCG CATCACCATC CTGTTTGCCG GCTCCAAGAA AAGCCTGGCT ACGGGTGTGC CCATGGCCCA GGTGTTGTTC GTGGGCAGTG GCATTGGCGC GATGATTCTG CCGCTGATGC TTTTCCACCA GATACAGCTG ATGGTGTGTG CTGTGCTGGC GCAGCGTTAT GCCAGCCGCG AGCAGGAGGT GGAGGTTTCG GCGTTGTCTT GA
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Protein sequence | MDTVMKYLRM LFDNFTLALL GVVLIATVLP CAGDGAVYFG WLTNLAIGLL FFLHGAKLSR EAIIAGAGHW RLHLLVFSCT FVLFPLLGLA FKPLFVPLVG NELYLGILYL CALPATVQSA IAFTSLARGN VPAAICSAAA SSLLGIFLTP LLVMLLLGAG GDTGSGLDAV LKITLQLLVP FVAGQVARRW IGAWVKRNAR WLKVVDQGSI LLVVYTAFSE AVVTGLWHTV SPQHLAGLFV VCAILLAVVL FGTRLLGKAL GFDLEDRITI LFAGSKKSLA TGVPMAQVLF VGSGIGAMIL PLMLFHQIQL MVCAVLAQRY ASREQEVEVS ALS
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