| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2798 |
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| Symbol | |
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| ID | 5190414 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 3181693 |
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| End bp | 3183444 |
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| Gene Length | 1752 bp |
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| Protein Length | 583 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640587248 |
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| Product | surface antigen (D15) |
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| Protein accession | YP_001268114 |
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| Protein GI | 148548012 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0729] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.150129 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCGCA TGACGTATTC AGGAAGATTG ACCTGGGGCC TGGTTTTCTG GGTCGCCAGT
TTCGCAGCAT GGGGCCAGAG CGAGTTGTTG GTGAAGGTGA AGCCGGCCAA CAAGGCGCTC
AAGGCCAATG TCGAAGGCTA TATAGGCACA TTGGGTGACC GCGACGAAGA AGCTCTTTTA
CGCTTCAGTC GCGGGGCAGA GGAGCAGGCG CGCAAAGCGG CGCAGGCACT CGGCTACTAT
CAGGCGCAGA TCGATACCGA GGTCAAGCCC GCCAGCGACG CAGACCATCC CCCACAACTG
ATCATCAGCA TCAACCCGGG CGAACCGATT CGCCTGCGCA ACGTGACCGT GCGCATCGAG
GGCCCTGCCA GCGAGATGAA GGCCTTCCGC GTGCCTGACA GCAAGGCCCT GCGTGCGGGT
GAACAACTCA ATCACGGCCA TTACGAGGAT GCCAAGCGGC TGATCCAGAA CCAGGCGTCG
CGCTATGGCT TCTTCAGTGG GCGCTTCAGT AGCCAGCGCC TGGCCGTCGA CCCGCAAGCC
GGTGTGGCCG ATATCGATCT GGTCTATCAG AGTGGCCCAC GTTATCGCCT GGGCGCCGTC
ACCTTCGGTG GCGACACGCC GCTGGACGAG GACCTGCTGC AGCGCATGGT TTCGTTCAAA
CCGGGCACCC CTTACGACTC GGAACTGATC GCGGAACTGA ACAACGACCT GCAATCGAGC
GGCTATTTCG AAGGCGTGCG TGTGGATGCG GCACCCACTG CTGCTGTGGG CGAAGAAGTC
CCGGTGGATG TTCACCTGGA AACCCGTAAA CCACGCACCA TGGGCCTTGG CCTGGGTTTC
TCGACCGACG TCGGGCCGCG CGGCAAGGCC AACTGGACCC GCCACTGGGT CAACCCGCAA
GGTCACAGCT ATGGCTGGGA AACCGAACTG TCGGCACCGC GCCAGAACGT CGGCCTGTGG
TACGACATTC CGCTCGATCC GCCGCTGACC GACAAGCTGC GCTTTGCCGG TGGCTACCAG
AACGAGGAGC TTGCCGGCAC CGACACGCTC AGCAAGTTGT TGACGGTCGG CCCCGAGTGG
CACAGCAAGC TGCCCAGTGG CTGGCAGCGG GTGATTTCGC TCAAGTACCA ACGCGAAGAA
TATCGCCTGG GTGATGACTC CGGATTGAGT AACCTGTTGA TGCCTGGCAT CAGCTATTCC
TTCCTGCGCA GTGACAACCG CATCGATCCG CACAATGGCT ATCGCCTGCA GTTCGATGTT
CAAGGTGCCA AGGAAGGGCT GGTTTCCGAC ACCAACCTGC TGCACGGCAA CGTATTGCTC
AAAGGCCTGA CCACGCTCGG CCACAACCAT CGCTTTCTCG GGCGCGTACA GTTTGGTGGC
AGTGCGACCA ATGGCTTCAA GAACAACATT CCGCCGTCGC TGCGTTTCTT CGCGGGTGGC
GACCAGAGTG TGCGCGGTTA CGACTACCAG ACCCTGTCGC CTAAGAACAG CGACGGTGAC
CGTATTGGCG GGCGCTACCT GGTGGCAGGC AGTGTCGAGT ACCAGTATTC GCTGACCGAA
AAATGGCGGG TCGCGACGTT CGTCGACCAA GGCAACTCGT TCAATGACCT GGAGCTGCCC
AGCCTCAAGA CCGGTGTCGG CTTTGGTGTG CGCTGGGTAT CGCCGGTCGG GCCGCTGCGC
CTGGACCTGG CCAAGGCGTT GGATGACGAA GGGGGCATTC GCCTGCACTT TTCCATGGGG
CCCGAGCTGT GA
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| Protein sequence | MRRMTYSGRL TWGLVFWVAS FAAWGQSELL VKVKPANKAL KANVEGYIGT LGDRDEEALL
RFSRGAEEQA RKAAQALGYY QAQIDTEVKP ASDADHPPQL IISINPGEPI RLRNVTVRIE
GPASEMKAFR VPDSKALRAG EQLNHGHYED AKRLIQNQAS RYGFFSGRFS SQRLAVDPQA
GVADIDLVYQ SGPRYRLGAV TFGGDTPLDE DLLQRMVSFK PGTPYDSELI AELNNDLQSS
GYFEGVRVDA APTAAVGEEV PVDVHLETRK PRTMGLGLGF STDVGPRGKA NWTRHWVNPQ
GHSYGWETEL SAPRQNVGLW YDIPLDPPLT DKLRFAGGYQ NEELAGTDTL SKLLTVGPEW
HSKLPSGWQR VISLKYQREE YRLGDDSGLS NLLMPGISYS FLRSDNRIDP HNGYRLQFDV
QGAKEGLVSD TNLLHGNVLL KGLTTLGHNH RFLGRVQFGG SATNGFKNNI PPSLRFFAGG
DQSVRGYDYQ TLSPKNSDGD RIGGRYLVAG SVEYQYSLTE KWRVATFVDQ GNSFNDLELP
SLKTGVGFGV RWVSPVGPLR LDLAKALDDE GGIRLHFSMG PEL
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