| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2790 |
|---|
| Symbol | |
|---|
| ID | 5194274 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 3172313 |
|---|
| End bp | 3174604 |
|---|
| Gene Length | 2292 bp |
|---|
| Protein Length | 763 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640587240 |
|---|
| Product | peptidase S45, penicillin amidase |
|---|
| Protein accession | YP_001268106 |
|---|
| Protein GI | 148548004 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2366] Protein related to penicillin acylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.311234 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTTGCG TCGGCCTGGC CGCTGCCCTG GTGGCCTTCA GCGTCGGTGT GCAGGCGCAG
CCCGCGCCAG CCGACGCCAG TGCCCAGATC CGCTATACCC GATACGGCGT ACCGCATATC
GTGGCCAAGG ATGAGCGTGG CCTGGGCTAT GGCGTCGGCT ATGCCTACGC CCAGGACAAC
CTATGCCTGC TCGCCAATGA AGTGCTGACC GTGAGCGGTG AGCGCTCACG CTATTTCGGC
GCCAAGGGCA AGACCCTGGA GCAGCGTGAC AACCTGACCA GCGACCTGTT CTTCACCTGG
CTCAATAGCC CAGCGGCGGT CGATGCCTTC CTGCAGGCGC AACCCGCGCC GGTGCAGGCG
TTGCTGGCGG GTTACGCCAG CGGCTACAAC CGGGCGTTGG TCGAACGCCG TCGTCAAGGG
CTGCCCGCCG AGTGTGGCGA TGGTGAGTGG GTGCGGCCCA TCAGCAGCCA GGATCTGGTC
AAACTGACCC GCCGTTTACT GGCCGAGGGC GGTGCCGGGC AGTTCGTCGA GGCGTTGGCA
GGGGCGCAAC CGCCAACGCT GGCCCGTGCG CAATCGTCAG CGGGCTTTGC CAGCGCGTTG
GCCCGGCAGG AGCGGTTCGC CGCGGAGCGC GGCAGCAATG CGGTGGCAGT AGGCGCGCAG
CGTTCAGCCA ATGGCCGCGG CCTGTTGCTG GCCAACCCGC ACTTCCCGTG GATGGGCGGC
ATGCGCTTCT ACCAGATGCA ACTGACCATT CCTGGTCAGC TTGATGTGAT GGGCGCGGCG
CTACCGGGAC TGCCGGTGGT CAACATCGGT TTCAACAAGC ACCTGGCGTG GACGCACACC
GTCGACACTT CCAAGCACTT CACGCTCTAC CGCCTGCAAC TCGACCCCAA AGACCCGACG
CGCTATATGT TTGATGGCAA GTCGCTGCCG ATGGCCCGGC AAACCATCCG TGTGGCGGTC
AAGGGCACGG ATGGCAGCCT GAGCCAGATT GAGCGGCCGG TCTACAGTTC GCAGTTCGGC
CCGGTGGTGC AATGGCCAGG CCGCCTGGAC TGGGATGCGC AGGCGGCCTA CAGCGTGCGA
GACGCCAACC TTGAGAACTC GCGGGTGTTG CAGCAGTGGT ACCAGATCAA CCGAGCCGAC
AGCCTGGCGG CATTGAAGGG ATCGGTCGAG CAGTTGCAAG GTATCCCTTG GGTCAACACG
CTGGCCGTGG ACGAGGGAGG GCGGGCCTTG TACCTGAACC AGTCGGTAGT GCCCTATGTT
GACCAGCAAC TGTTGGATAC CTGCAGCAGC CCGCAGGCAC AAGGGCGCCT GGTGGTGCTG
GATGGCTCGC GTAGCGCCTG CCAGTGGAAG GTTGACGCGC AGGCGGCGCA ACCGGGCATC
TTCCCGGCGC GGCTGCTGCC AAGCCTGGAG CGTGAAGACT TCGTTCAGAA CTCCAACGAC
CCGGCCTGGA TGGCCAACCC GGCGCAGCCG CTGACCGGCT ACTCTCCACT GATCAGCCGC
AATGATCAGC CGCTGGGCAT GCGTGGCCGC TTTGCCTTGC AGCGCCTGCA GGGCAAAGCC
CGGTTAGGTG CTGATGAACT GCAGCGCATG GTCACCGATG ATGAGGTGTA CCTGGCCAGC
CTGGTGTTGC CGGACCTGCT GCAATGGTGC AAGGGTGCCA GCGCAGATGT GCAGGGCGTG
TGCAGCAGTC TGGCCGCCTG GAACGGCAAG GCCGACCTCG ACAGTGGCAT GGGCCTGGTG
CACTTCCAGA ACCTGTTCAA TGCGCTGGCC GAGCACCCGG AAAGCTGGCG AGTGGCATTC
AACCCGGCCG ACCCGCAGCA CACCCCGCGC GGCCTGGCTG TCGAGCAGGC GGTGGTGAGC
AGGTTGGTAC ATCAGGCAGC ACTGGCGTCG CTCAAGCAGG TCAGTGAAAG TGGCGTTGCC
GGGGAAGCGC GCTGGGGGCA GGTGCAACAG GCCCTTGATG GTACGCCGGT ACCAGGTGGC
CCGCAGGCGC TAGGGGTGTA CAACGCGATC TACAGCGTGC CGCACGGGCA GGGCAAGCGG
CTGGTGGTGA GTGGCACCAG CTACCTGCAA CTGGTCAGCT TTACCGACAA GGGGCCAGAA
GCCCGTGGCC TGCTTGCGTT TTCCCAGTCG AGTGAAAAGT CTTCGGCGCA TGCCAGTGAC
CAGACCAAGG CATTTGCGGC CAAGCAACTG GCGGTGATTC CGTTTACCGA GGCGCAGATC
AAGGCAGACC CGGCGTATCG GGAAGTGGTG ATCAGTGAGC GGGACAAGGG GGTGGTAGTC
AGCCAGCCCT GA
|
|---|
| Protein sequence | MTCVGLAAAL VAFSVGVQAQ PAPADASAQI RYTRYGVPHI VAKDERGLGY GVGYAYAQDN
LCLLANEVLT VSGERSRYFG AKGKTLEQRD NLTSDLFFTW LNSPAAVDAF LQAQPAPVQA
LLAGYASGYN RALVERRRQG LPAECGDGEW VRPISSQDLV KLTRRLLAEG GAGQFVEALA
GAQPPTLARA QSSAGFASAL ARQERFAAER GSNAVAVGAQ RSANGRGLLL ANPHFPWMGG
MRFYQMQLTI PGQLDVMGAA LPGLPVVNIG FNKHLAWTHT VDTSKHFTLY RLQLDPKDPT
RYMFDGKSLP MARQTIRVAV KGTDGSLSQI ERPVYSSQFG PVVQWPGRLD WDAQAAYSVR
DANLENSRVL QQWYQINRAD SLAALKGSVE QLQGIPWVNT LAVDEGGRAL YLNQSVVPYV
DQQLLDTCSS PQAQGRLVVL DGSRSACQWK VDAQAAQPGI FPARLLPSLE REDFVQNSND
PAWMANPAQP LTGYSPLISR NDQPLGMRGR FALQRLQGKA RLGADELQRM VTDDEVYLAS
LVLPDLLQWC KGASADVQGV CSSLAAWNGK ADLDSGMGLV HFQNLFNALA EHPESWRVAF
NPADPQHTPR GLAVEQAVVS RLVHQAALAS LKQVSESGVA GEARWGQVQQ ALDGTPVPGG
PQALGVYNAI YSVPHGQGKR LVVSGTSYLQ LVSFTDKGPE ARGLLAFSQS SEKSSAHASD
QTKAFAAKQL AVIPFTEAQI KADPAYREVV ISERDKGVVV SQP
|
|---|
| |