Gene Pput_2789 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_2789 
Symbol 
ID5194273 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3171469 
End bp3172191 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content63% 
IMG OID640587239 
ProductUDP-2,3-diacylglucosamine hydrolase 
Protein accessionYP_001268105 
Protein GI148548003 
COG category[S] Function unknown 
COG ID[COG2908] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR01854] UDP-2,3-diacylglucosamine hydrolase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.812718 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTCTGC TGATCTCTGA TCTGCACCTG CAAGAAGAAC GCCCGGATAT TTCCCGGGCG 
TTTCTTGATC TGCTCGATGG CCGCGCCCGC CACGCAAAGG CCCTGTACAT CCTTGGTGAC
TTCTTCGAAG CGTGGATTGG CGACGATGCC ATGACGCCCT TCCAGCAGTC GATCTGCCAG
GCCATGCGCC GGCTGAGCGA CAGTGGCACG GCCATCTACC TGATGCATGG CAACCGTGAC
TTCCTGATTG GCCAGGCCTT CTGCGATGCC GCTGGTTGCA CCTTGTTGAG CGACCCCAGC
GTGATCGAGC TGGGCGGTGA ACAGGTGCTG CTGATGCATG GCGACACCCT GTGCACCCGC
GACCTGGGCT ACATGAAGAT GCGCCGCCTG CTGCGCAATC CGCTGAGCTT GTGGATCCTG
CGCCACCTGC CGCTGTCGGC CCGCTACAAG CTGGCACGCA AGCTGCGCAG CGAAAGCCGC
ACGCAAGTGC GGATGAAGTC CACCGAAATC GTCGACGTCA CGCCAGAGGA AGTCCCCAAG
GTAATGGCGG CGCATGGCGT GCGCACCTTG GTGCATGGCC ATACCCATCG GCCAGCGATT
CACAAGCTGG TGGTCGATGG CCAGCCGGCA CGGCGTATCG TACTGGGCGA CTGGGACCGC
CGCGGTTGGG CCTTGCAGGT TGACGAGCAG GGCTTTCAGC TGGCGCCGTT CGAGTTTTCC
TGA
 
Protein sequence
MILLISDLHL QEERPDISRA FLDLLDGRAR HAKALYILGD FFEAWIGDDA MTPFQQSICQ 
AMRRLSDSGT AIYLMHGNRD FLIGQAFCDA AGCTLLSDPS VIELGGEQVL LMHGDTLCTR
DLGYMKMRRL LRNPLSLWIL RHLPLSARYK LARKLRSESR TQVRMKSTEI VDVTPEEVPK
VMAAHGVRTL VHGHTHRPAI HKLVVDGQPA RRIVLGDWDR RGWALQVDEQ GFQLAPFEFS