| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2778 |
|---|
| Symbol | |
|---|
| ID | 5195306 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 3158447 |
|---|
| End bp | 3159421 |
|---|
| Gene Length | 975 bp |
|---|
| Protein Length | 324 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640587228 |
|---|
| Product | delta-aminolevulinic acid dehydratase |
|---|
| Protein accession | YP_001268094 |
|---|
| Protein GI | 148547992 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0113] Delta-aminolevulinic acid dehydratase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.0997001 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAACC AATTCCCGTC CGTTCGTCCC CGCCGCCTGC GCCAGAACGA GTCCCTGCGC
ACGATCTTCC AGGAAACCGA GTTCCGCCTT GAAGACCTGA TCCTGCCGAT CTTCGTCGAA
GAGGGCATCG ATGATTTCGT GCCGATCACC AGCATGCCCG GTGTCAATCG TATCCCCGAG
AAACTGTTGG CCCAGGAAAT CGAGCGCTAT GCCCGCGCCG GTATCAAGTC GGTTATGACC
TTTGGCGTAT CGCACCACCT GGATGCCGAT GGCAGCGACA CCTGGAACGA AAACGGCCTG
GTTGCGCGCA TGTCGCGTAT CTGCAAGGAC ACCGTGCCGG AAATGGTGGT GATGTCCGAC
ACCTGCTTCT GCGAATACAC CAGCCACGGC CACTGCGGCG TGCTGCATGA CCATGGCGTG
GACAACGACG CCACCCTGGC CAACCTGGGC AAGCAGGCCG TCATCGCCGC TGCTGCCGGT
GCCGACTTCA TTGCCCCCTC GGCGGCGATG GACGGCCAGG TGCAGGCTAT CCGCAGCGCG
CTGGACGGTG CCGGTTTCCA CGACACCGCG ATCATGGCCT ACTCGACCAA GTTCGCCTCG
TCGTTGTATG GCCCGTTCCG TGAGGCCGGC GGCACTGCAC TGAAGGGTGA CCGCAAAAGT
TACCAGATGA ACCCGATGAA CCGCCGCGAA GCGGTGCGCG AGTCGCTGCT CGACGAGCAG
GAAGGCGCGG ACGTGCTGAT GGTCAAGCCG GCCGGTGCCT ACCTTGATGT GATCGCCGAC
ATCCGCGCCG CTTCGCGCCT GCCACTGGCG GCGTACCAGG TGAGTGGCGA GTATGCGATG
ATCAAGTTCG GTGGCCTGGC CGGTGCCATC GACGAAGGCC GGGTGGTGCG CGAAAGCATT
GGCGCAATCA AGCGTGCCGG TGCCGACCTG ATCCTGACCT ACTTCGCCAT GGACCTGGCG
CGCGAAGGTA TCTGA
|
|---|
| Protein sequence | MSNQFPSVRP RRLRQNESLR TIFQETEFRL EDLILPIFVE EGIDDFVPIT SMPGVNRIPE
KLLAQEIERY ARAGIKSVMT FGVSHHLDAD GSDTWNENGL VARMSRICKD TVPEMVVMSD
TCFCEYTSHG HCGVLHDHGV DNDATLANLG KQAVIAAAAG ADFIAPSAAM DGQVQAIRSA
LDGAGFHDTA IMAYSTKFAS SLYGPFREAG GTALKGDRKS YQMNPMNRRE AVRESLLDEQ
EGADVLMVKP AGAYLDVIAD IRAASRLPLA AYQVSGEYAM IKFGGLAGAI DEGRVVRESI
GAIKRAGADL ILTYFAMDLA REGI
|
|---|
| |