| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2777 |
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| Symbol | |
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| ID | 5195305 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 3156786 |
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| End bp | 3158288 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640587227 |
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| Product | proline/glycine betaine transporter |
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| Protein accession | YP_001268093 |
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| Protein GI | 148547991 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00883] metabolite-proton symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.426081 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCTC GCAAGAAAAG CGTCCAGCCA ATCGGCCTGA AGGACATCAC CATCGTCGAC
GACGCCAAGA TGAAGAAGGC GATCACGGCC GCCGCGCTGG GCAACGCCAT GGAGTGGTTC
GACTTTGGGG TCTATGGCTT CGTCGCTTAT GCCTTGGGCA AGGTGTTTTT CCCCAACGCC
GACCCCAGCG TGCAAATGAT CGCGGCCTTG GCCACCTTCT CGGTGCCGTT CCTGATTCGG
CCCCTTGGCG GGTTGTTCTT CGGCGCCTTG GGCGACAGGT TCGGGCGGCA GAAAATCCTC
GCGGCGACCA TCGTGATCAT GTCCCTGAGC ACCTTCGCCA TCGGCCTGAT ACCGTCCTAT
GCAAGCATTG GTATCTGGGC GCCAATCCTG TTGCTGCTGG CCAAGATGGC CCAGGGCTTT
TCGGTGGGTG GCGAATACAC CGGTGCCTCG ATCTTCGTTG CCGAGTACGC GCCTGACCGC
AAGCGCGGCT TTCTCGGCAG CTGGCTGGAT TTCGGTTCGA TTGCCGGCTT TGTATTGGGC
GCAGGGGTGG TGGTGCTCAT TTCCACGGTG CTGGGTGAAG AAAAGTTCCT CGAATGGGGT
TGGCGCCTGC CGTTTTTCCT GGCCCTGCCG CTGGGCATCA TCGGCCTTTA CCTGCGCCAT
GCGCTGGAAG AAACACCTGC GTTCCAGCAG CACGTCGACA AGCTGGAACA GGGCGATCGT
GAAGGCCTGG CCTCCGGGCC CAAGGTGTCG TTCAAGGAGG TGGCCACCCA GCACTGGCGC
AGCCTGGTGA CCTGCATCGG CGTGGTAATC GCCACCAACG TCACCTACTA CATGCTGCTT
ACCTACATGC CCAGCTACCT GTCGCACAAC CTGCACTACA GCGAAGACCA TGGCGTGCTG
ATCATCATCG CGATCATGGT CGGCATGCTG TTCGTGCAGC CGATCATCGG TCTGCTCAGC
GACAAGTTTG GCCGACGGCC GTTCATCATC GTCGGCAGTG TCGGCCTGCT GGCCTTGGCC
ATTCCGGCAT TCATGCTGAT CAACAGTGGG GTGCTTGGGC TTATTTTCGC CGGCCTGCTG
ATCATTGCCG TGTTGCTGAA CTTCTTCATC GGCGTCATGG CCTCGACGCT GCCGGCCATG
TTCCCCACGC ACATCCGTTA CAGCGCCCTG GCCAGCGCCT TCAATATCTC GGTGCTGATC
GCCGGCCTTA CTCCAACCCT CGCTGCGTGG CTGGTGGAGA CCACAAACGA CCTGTACATG
CCGGCCTATT ACCTGATGGT GATCGCTGCT GTCGGCCTGG TCACCGGCCT GACCATGAAG
GAAACCGCCA ACAAGCCCCT GCGCGGCGCC GCCCCTGCGG CGTCAGACAT CGAAGAGGCG
CGTGAACTGC TGCAGGAGCA CCACGACAAC ATCGAGCAGA AGATCGAGGA CATCGATGCG
CAGATCGCCG AGTTGGAAGC CAAGCGCGAA AAACTGGCAC AGCAGCACCC GCGTATCGAA
TGA
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| Protein sequence | MKPRKKSVQP IGLKDITIVD DAKMKKAITA AALGNAMEWF DFGVYGFVAY ALGKVFFPNA
DPSVQMIAAL ATFSVPFLIR PLGGLFFGAL GDRFGRQKIL AATIVIMSLS TFAIGLIPSY
ASIGIWAPIL LLLAKMAQGF SVGGEYTGAS IFVAEYAPDR KRGFLGSWLD FGSIAGFVLG
AGVVVLISTV LGEEKFLEWG WRLPFFLALP LGIIGLYLRH ALEETPAFQQ HVDKLEQGDR
EGLASGPKVS FKEVATQHWR SLVTCIGVVI ATNVTYYMLL TYMPSYLSHN LHYSEDHGVL
IIIAIMVGML FVQPIIGLLS DKFGRRPFII VGSVGLLALA IPAFMLINSG VLGLIFAGLL
IIAVLLNFFI GVMASTLPAM FPTHIRYSAL ASAFNISVLI AGLTPTLAAW LVETTNDLYM
PAYYLMVIAA VGLVTGLTMK ETANKPLRGA APAASDIEEA RELLQEHHDN IEQKIEDIDA
QIAELEAKRE KLAQQHPRIE
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