Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_2773 |
Symbol | |
ID | 5190600 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 3152097 |
End bp | 3153014 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640587223 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001268089 |
Protein GI | 148547987 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCACTCA CCTTGCGCCA GGTCCGCTAC TTCGTTGCCA CCGCTGAAAT CGGCCAGATC TCCCAAGCGG CAATCCACCT GAACATCTCC CAGTCCGCAG TGACCACGGC CATCAAGGAG CTGGAAGCGA TGCTCGGCGT GCTGTTGTTC CAGCGCTCGG CCCAAGGCAT GAGCCTGACC GAAGCCGGCC GGCACTTCTT GAACCGTGCC TACGTCATCC TGCGCAGTGT CGACGATGCG TTGAACAGCC CGCTTCCGGA CGTGCGCGCC AGTGGCCTGT TGCGCCTGGC GGCGAGTTAC ACGGTGATCG GCTACTTCCT GCCGCACCAC TTACAGCGCC TGGAGCACTG GCATCCGGAC GTGACCCTGG AGCTGTACGA GCAGGAACGC AGCGCCATCG AGCAAGGCCT GCTGGAGGGG CGTTTCGACA TGGCGGTGGT GCTCACCGCC AACCTCACCC ACCCCGACAT CGTCTCGGAA ACCCTGTTCA ACTCCGAGCG CCGGCTGTGG CTGCCCGGGC ATCACCCACT GTGCGAGCGC TCGGCCGTGA GCCTGGCCGA GGTGGCCTGT GAGCCGTTCA TCCTGTTGAC CGTGGATGAG GCCGAGCACA GTGCCATGCG CTACTGGGAG CAGGCCGGGC AACGGCCAAG CGTAAGGGTG CGGACCAGCT CGGTGGAGGC CGTGCGCAGC ATGGTCGCCA ATGGCAGCGG TGTGGCGATC CTGTCGGACC TGGTGCACCG GCCGTGGTCG CTGGAGGGCA AGCGTATCGA GACAGTGAGC ATCAGCGACC CGGTCACACC GATGAGCGTG GGGTTGGCCT GGCACCGGGA ACGGGCATTC AGCCCGGCGA TGCAGGCGGT GCGCAATTAC TTCCATGATG CGTTTCTGGC ACCGCAGCAG TTGTCGGCCC GGCGCTGA
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Protein sequence | MSLTLRQVRY FVATAEIGQI SQAAIHLNIS QSAVTTAIKE LEAMLGVLLF QRSAQGMSLT EAGRHFLNRA YVILRSVDDA LNSPLPDVRA SGLLRLAASY TVIGYFLPHH LQRLEHWHPD VTLELYEQER SAIEQGLLEG RFDMAVVLTA NLTHPDIVSE TLFNSERRLW LPGHHPLCER SAVSLAEVAC EPFILLTVDE AEHSAMRYWE QAGQRPSVRV RTSSVEAVRS MVANGSGVAI LSDLVHRPWS LEGKRIETVS ISDPVTPMSV GLAWHRERAF SPAMQAVRNY FHDAFLAPQQ LSARR
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