| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2712 |
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| Symbol | |
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| ID | 5190650 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 3087915 |
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| End bp | 3088736 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640587164 |
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| Product | helix-turn-helix domain-containing protein |
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| Protein accession | YP_001268030 |
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| Protein GI | 148547928 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.741725 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCGAC TGTCGACCCT GCTTAAGCAC TTCAACCTGT ACGCTAGCGC GTTTCACCAG
GGTGGGTTCT GTGGAACGAC CCACCTTGGG CAACACAGTG TCGGGCACGC CCATCTGTTG
CGCTCGGGGC GTCTGGCCTT CAAGGACAAG CGTGGCCAGC GTATCGAGTT GACCGAACCC
ACCCTGATTC TGGCGGTGCG CCCGCAGGAG CATCACTTGC TGGCCACCGA CGCCGATGAA
GCGGAGTTAG TGTGCGCCAC CCTGCAGTTC GATGGCGGCG CCAACAATCC GCTGACCCTG
GCTTTGCCAG ACTTCATCAT CAAGCCCCTC GGCGAATTGC AAGGCCTTGA TGGCACCCTT
GACTGGCTGT TCGAAGAAGC CTTTGGAGAT GAGTATGGCC GTGATGTCAT TCTCAATCGC
TTGTTCGAGC TGATGATCAT CCAGCTGCTG CGCCACCTGA TCGCCAGCCG CAGCATCGCT
TCGGGAATGA TGGCGGGTCT TGCCAACGCT CAGTTGTCTC GCGCGCTTGT GGGGATCCAC
GATGAGCCGC AGCGCAATTG GTCGGTGGCG GAACTGGCGA ATCTTTCCGG CATGTCGCGG
GCAAGCTTCG CTTCGCACTT TCGCGAGATC GTGGGTATTA CGCCTGCGGA CTACCTGGCG
AACTGGCGCA TCAGTTTGAC GCAAAAACGT CTTCGCGAAG GGCGCCCCAT TGCCCTGATC
GCCGATGAGG TCGGCTACGA AAGTCCTTCT GCGCTAGCCC GAACCTTTCG CCGCAAGGTG
GGCGCGAGCC CGAAACAATG GCTGCAGCAG GGGACGGTGT GA
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| Protein sequence | MDRLSTLLKH FNLYASAFHQ GGFCGTTHLG QHSVGHAHLL RSGRLAFKDK RGQRIELTEP
TLILAVRPQE HHLLATDADE AELVCATLQF DGGANNPLTL ALPDFIIKPL GELQGLDGTL
DWLFEEAFGD EYGRDVILNR LFELMIIQLL RHLIASRSIA SGMMAGLANA QLSRALVGIH
DEPQRNWSVA ELANLSGMSR ASFASHFREI VGITPADYLA NWRISLTQKR LREGRPIALI
ADEVGYESPS ALARTFRRKV GASPKQWLQQ GTV
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