| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2711 |
|---|
| Symbol | |
|---|
| ID | 5190649 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 3086974 |
|---|
| End bp | 3087852 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640587163 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001268029 |
|---|
| Protein GI | 148547927 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATCTGT TCGACAGCAT GCGCATCTTC GTGCGCGTCG TGGAGCGCGG CTCGTTTTCC
GCAGTGGCTC GGGAGCTGAA CATGGGGCAG CCGGCAGTCA GCAAGCAGGT CCGTGCGTTG
GAGCAGTACC TGGGTGGCGC CGTGTTCGCC CGCAGCACCC GGCACCTCGC CCTCACCGAT
CAAGGGCAAC GCTTCTACAG CCACTGCCAG GAGATTCTCA GCCAGCTGGA GCATGCAACA
CGCAGCTTCG CCAGCGGCCA GGAGCAGATC GCCGGCCCCC TGCGAATAGC CGCACCGGTC
AGCTATGGGA GGCTGTGCAT AGCGCCCCTG ATCGGGGCTT TTCTACAGCG CCACCCCTAT
GTGCAGATTG ACCTGCGCCT GAACGATTAC AACGAAGACC TGCTCGTGGA AAACATCGAC
CTGGCCATCC GCATTGGTGT GGTGAAGAGC GAGGGGCTGG TGGCCGTGCC TCTGGGCACC
AGCACACGGC GAGTCTATGC TGCACCGGCC TATCTCGAAC GCCATGGCCG GCCACGTGAG
CCCGCCGAAC TGGCAGGCCA CAACTGCATC GCCTTCACCT TGCTTGAGCA TTACGACCGC
TGGCACTTCA CCCATCGTGG CGAAGCACTT GAGGTTGCAA TCAAAGGCAA CGTCACCAGC
AACAACAGCG AGGCCATTCG TGAAATGGTC CTCGGTGGTC TGGGCATCTC CCTGTCTCCG
CATTGGCTGT TTGCTGCGGA CTTCGAGCAG GGTAGCGTGT GTAGCCTGCT CGACGAATAC
CAGACGACCG CGCTGCCGGT CAGCGCCGTG TTCAGCCGTG AGCGACGCCG CTCGGCAAGG
ACGATGGCGT TCATCGATTT TCTTCGGGAG AACGTGTAA
|
|---|
| Protein sequence | MDLFDSMRIF VRVVERGSFS AVARELNMGQ PAVSKQVRAL EQYLGGAVFA RSTRHLALTD
QGQRFYSHCQ EILSQLEHAT RSFASGQEQI AGPLRIAAPV SYGRLCIAPL IGAFLQRHPY
VQIDLRLNDY NEDLLVENID LAIRIGVVKS EGLVAVPLGT STRRVYAAPA YLERHGRPRE
PAELAGHNCI AFTLLEHYDR WHFTHRGEAL EVAIKGNVTS NNSEAIREMV LGGLGISLSP
HWLFAADFEQ GSVCSLLDEY QTTALPVSAV FSRERRRSAR TMAFIDFLRE NV
|
|---|
| |