Gene Pput_2708 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_2708 
Symbol 
ID5192205 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3085119 
End bp3085634 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content56% 
IMG OID640587160 
Producthypothetical protein 
Protein accessionYP_001268026 
Protein GI148547924 
COG category[S] Function unknown 
COG ID[COG2320] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.95734 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACTGA CCAGCAAGAT TGCCCCCTAC GATCCCACAT GGCCCGCCCG CTTCCTGACA 
GACAAGCCAC TCATTGCCTC GGCATTTGAC GCTGAACTGA TTGCTGTCCA CCACGTTGGA
AGCACGTCTG TCCCAGGGCT GGCGGCGAAG CCCGAACTCG ATGTGCTCAT TGAGGTTCAC
GCGCATCGCA ATACCTCGAC GCGGGACGAG GTGTTGATGG CTCTGGGGTA TGTACGGGGA
AGTGATCTGT CAGAGGGCCA TCATTTCTAC CGGCGCAATG TGGATGGGAT TCGCACGCAC
AAGCTCCATG TTTGTACCCG CGACCACCTG ACGATCACTC AGATGCTGGG GTTCAGAGAT
TTGCTTAGGC GCGATGCCTC GATCCGCCAA CAGTATGAAA CGCTGAAGCT TCAGTTGGAG
TCGATCAATA CGGGTGGGAT GGCTGAGTAT CTAGAGAAAA AGGCGCCTTT CATTATCGCG
GCGCTGCTTC ATGCCGGTAT AACCACGCGT GAATGA
 
Protein sequence
MALTSKIAPY DPTWPARFLT DKPLIASAFD AELIAVHHVG STSVPGLAAK PELDVLIEVH 
AHRNTSTRDE VLMALGYVRG SDLSEGHHFY RRNVDGIRTH KLHVCTRDHL TITQMLGFRD
LLRRDASIRQ QYETLKLQLE SINTGGMAEY LEKKAPFIIA ALLHAGITTR E