| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2707 |
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| Symbol | |
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| ID | 5192204 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 3083789 |
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| End bp | 3084817 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640587159 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_001268025 |
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| Protein GI | 148547923 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.529174 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAGCG TATTTGTGAC CGGAGCAACC GGCTTGCTGG GCAACAACCT GGTGCGTGAA
TTGGTCGCTT GCGGCTACAC GGTCAAAGGC CTGGTTCGCT CAAAAGCCAA AGGTGAACAG
CAGTTCAACA ATCTGCCGGG GGTGGAACTG GTCGTTGGGG ACATGGCCAA GGTCGACGCA
TTCGCAGCGT CACTGCAAGG CTGCGATACG GTATTTCACA CAGCCGCGTT CTTCCGCGAT
AACTACAAGG GCGGCACCCA CTGGAACGAA CTCGAACAGA TAAACGTGTC GGGTACGCGG
CGCCTGCTTG AGCAGGCCTA CGGGGCCGGC ATACGACGGT TCATCCATAC GTCTTCCATT
GCTGTGCTCA ACGGCGCACC TGGCACGTCC ATCGAGGAGA ACTGCCTGAG GGCCGACGCC
GACGCCGATG ACTACTACCG CAGCAAGATC CTCGCTGACC GTGTCGTATT GTCGTTCCTG
GAGAGCCACC CCCAGATGCA TGCCTGTATG GTCCTGCCTG GCTGGATGTG GGGGCCTGGC
GACATTGGCC CAACCTCGTC GGGGCAATTG GTCAACGATG TGGTACAGGG CAAGTTGCCC
GGGTTGATCC CTGGCAGTTT TTCCATTGTC GATGCCCGTG ATGTGGCATT GGCACACATT
GCCGCAGCCA GACATGGGCG CCGAGGTGAG CGCTATCTCG CGGCGGGTCG ACATATGACA
ATGCGCGAAC TGATGCCTGT TTTAGGATGC ATCGCGGGCG TCAAGACACC CGCTCGACAA
ATACCGCTGC CCTTTCTATA CACCTTGGCG GCTGTGCAGG AGATCTATGC GCGCCTGACC
GGCAGACCCA TTCTGCTGAG CATGGCCACG TTGCGTCTAC TGGTACGAGA GCAGGACCGC
ACCCGTTTCG ACCACCGCAA GAGTGAACAG GAGCTTGGAC TGAGTTTCCG GGCACTCGAG
CTGACAATCG CCGACACCGT GGCGTGGTAC CGTGATCATG GCGGGTTTGA AAAAGGCAGC
CGACTGTGA
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| Protein sequence | MRSVFVTGAT GLLGNNLVRE LVACGYTVKG LVRSKAKGEQ QFNNLPGVEL VVGDMAKVDA
FAASLQGCDT VFHTAAFFRD NYKGGTHWNE LEQINVSGTR RLLEQAYGAG IRRFIHTSSI
AVLNGAPGTS IEENCLRADA DADDYYRSKI LADRVVLSFL ESHPQMHACM VLPGWMWGPG
DIGPTSSGQL VNDVVQGKLP GLIPGSFSIV DARDVALAHI AAARHGRRGE RYLAAGRHMT
MRELMPVLGC IAGVKTPARQ IPLPFLYTLA AVQEIYARLT GRPILLSMAT LRLLVREQDR
TRFDHRKSEQ ELGLSFRALE LTIADTVAWY RDHGGFEKGS RL
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