Gene Pput_2704 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_2704 
Symbol 
ID5195383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3080911 
End bp3081924 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content60% 
IMG OID640587156 
Productalcohol dehydrogenase 
Protein accessionYP_001268022 
Protein GI148547920 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAGCC GAATCATGCA AGCACTGACC TTCAAGCGCT ACGGCAAGTC ACCCGACATC 
GGGTTGGCCG ACGTTCCCCG CCCCACGCCA AAGGCTGACG AATTACTGGT GCACGTCCAC
GCTGCCGGCC TGAATCCGAT CGACAACATG ATTCCAACGG GGATGTTCAA GCCAGTATTG
CATTTCCAAC TGCCAGCCAC CCTGGGCAGC GATCTGGCCG GCATCGTGAC CGAGGTGGGT
AGCAATGTGA CCCGCTTCAA GCCAGGCGAT GCTGTCTTCG CCAGCCTCTT CGATCTTGGC
ACAGGGGCGA TTGCTGAATT CGCGGTTGTG CCGGAAAGCG CCGCCGCGCT GAAACCGGCC
AATCTGAGCT TCGAGCAGGC GGCGTCCATC CCGATGGTCG GCCTCACCTC ATGGCAAGCG
CTCAAAGAGC GCCTCACGCT TCAGGCCGGG CAGAAGGTGT TCATTCCCGG CGGGTCCGGC
GGCATCGGTA CGTTCGCAAT CCAGTTGGCC AAACACCTCG GTGCAAAGGT GGGCACCACC
ACCAGTACAG GCAACGTTGA CCTGGTGCGC GCTCTGGGGG CGGACGAGGT TGTGGACTAC
AAGACGCAGG ATTTCGAGAC CGTGCTGCGC GACTACGACG CGGTGCTCGG AACCGTAAGG
GGGGATGCGA TTGAAAAATC CATGTCCATC CTCAGACCCG GAAGCCAGAT TGTCTCGCTC
ATTGGCCCAC TGGATGCTGC GTTCGCCCGG GCCAAACGCC TGAACGTCCT CCTGACCTTC
GTGTTCGGCC TGATGAGCCG CAAGATCATG CGCCTGGCAA AGAGGCGCAA TGTCAAATAC
TCGTTTCTTT TCGTGCAGCC CGACGGTGCC CAACTCGCCG AAATCGGCAA ACTTCTGGAC
GCCCAGCAAA TTAAGCCGGT GATCGACCGG GTATTTCCGT TCGAGGACGC AAAGGGTGCG
CTTGAGTACC TTGCTCAAGG GCGCTCCAAG GGCAAGGTCG TAATCAAGAT GTGA
 
Protein sequence
MNSRIMQALT FKRYGKSPDI GLADVPRPTP KADELLVHVH AAGLNPIDNM IPTGMFKPVL 
HFQLPATLGS DLAGIVTEVG SNVTRFKPGD AVFASLFDLG TGAIAEFAVV PESAAALKPA
NLSFEQAASI PMVGLTSWQA LKERLTLQAG QKVFIPGGSG GIGTFAIQLA KHLGAKVGTT
TSTGNVDLVR ALGADEVVDY KTQDFETVLR DYDAVLGTVR GDAIEKSMSI LRPGSQIVSL
IGPLDAAFAR AKRLNVLLTF VFGLMSRKIM RLAKRRNVKY SFLFVQPDGA QLAEIGKLLD
AQQIKPVIDR VFPFEDAKGA LEYLAQGRSK GKVVIKM