| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2691 |
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| Symbol | |
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| ID | 5193897 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 3067680 |
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| End bp | 3068498 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640587143 |
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| Product | shikimate 5-dehydrogenase |
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| Protein accession | YP_001268009 |
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| Protein GI | 148547907 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACC GCTACGCAGT GATCGGCCGA CCGATCAACC ACACCAAGTC CCCGCTGATT
CATGGCCTGT TCGCCCAGGC CAGCAACCAG CAGCTGGAAT ACGGGGCTAT CGAGGGCTCG
CTGGACGACT TCGAAGCCCA GGTACTGCAG TTTCGTAGCG AAGGCGGGAA GGGCATGAAC
ATCACTGCCC CGTTCAAGCT GCGTGCCTTC GAGCTGGCCG ACCGGCGCAG CGAGCGGGCG
CAATTGGCAC GGGCGGCCAA TGCGCTGAAG TTCGAGGATG GCCGCATCGT CGCCGAGAAC
TTCGATGGCA TCGGTTTGCT GCGGGACATC GAGGAGAACC TTGGCGAGCC GCTGCGCAAC
CGCCGTGTGC TGCTGCTGGG CGCTGGCGGC GCGGTGCGCG GGGCGTTGCT GCCGTTCCTG
CAGGCGGGGC CACGCGAGCT GGTGATCGCC AACCGGGACA TGGCCAAGGC GCTGGCGCTG
CGTAACGAGC TCGATCACCC GCGTCTGCGC ATCAGCCGCT ACGAAGCGCT GGAAGGGCAA
TCGTTCGACA TCGTGGTCAA CGCCACCTCG GCGAGCCTGA CCGCTGACTT GCCGCCACTG
CCGGCTGATG TGCTGGGTGA GGCGGCCTTG GCCTACGAGC TGGCCTATGG CAAAGGCCTC
ACGCCTTTCC TGCGCCTGGC CCGCGAGCAG GGCCAGGCGC GCCTGGCCGA TGGCGTCGGC
ATGCTGGTGG AGCAGGCCGC CGAGGCGTTC GCCTGGTGGC GCGGGGTGCG GCCCGACACA
CGTGCCGTGA TCAATCAGCT GACGATTCCC CTGGAGTAG
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| Protein sequence | MSDRYAVIGR PINHTKSPLI HGLFAQASNQ QLEYGAIEGS LDDFEAQVLQ FRSEGGKGMN
ITAPFKLRAF ELADRRSERA QLARAANALK FEDGRIVAEN FDGIGLLRDI EENLGEPLRN
RRVLLLGAGG AVRGALLPFL QAGPRELVIA NRDMAKALAL RNELDHPRLR ISRYEALEGQ
SFDIVVNATS ASLTADLPPL PADVLGEAAL AYELAYGKGL TPFLRLAREQ GQARLADGVG
MLVEQAAEAF AWWRGVRPDT RAVINQLTIP LE
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