| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2686 |
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| Symbol | |
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| ID | 5194373 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 3063701 |
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| End bp | 3064309 |
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| Gene Length | 609 bp |
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| Protein Length | 202 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640587138 |
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| Product | RNA polymerase sigma factor |
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| Protein accession | YP_001268004 |
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| Protein GI | 148547902 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.871223 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAGCC CCCCGGCTGG ATGGCCGGGG TACTTGCCTT ACACAAGGAA GCCACACACG
TTGAACTCGC CGGCCACTCC CTTCGACTTC CACCGCTGCC TGTTAGCCTG TGCACAGGGT
GACCGGCGGG CCCTGCAGGC GCTCTACGAT CACGAAAGCG CGCGCCTGCT GGGCGTTGCC
CGGCGTATCG CACGTGACGA CGCCACCGCA GAAGACATCG TCCACGATGC GATCATCCGC
ATCTGGACCC GCGCTGCCAG CTACGACCCG GCGCGCGGCT CGGCTCGAGG CTGGATCTAC
AGCATTACCC GCCACCTGGC GCTGAATTCG ATACGTGATA CCCGCCGTGA AACTGTACTG
ACCGATGCCG ACACCGAAAC TGCGTCAACA TTGCACGGGA GGATTGATGA CCTTGAGCTC
TGGTCCGGCT CAGCAAAGAT TTACCGCTGC CTTGAACAAC TGCAGCCCGC ACCGCAACGC
TGCATCCTGC ACGCCTACGT GGACGGCTGC AGCCACGCCG AGATAGCCGG TTTATTGGGC
GCGCCATTGG GCACTGTCAA GGCCTGGATC AAACGCAGCC TCAAAGCGCT ACGGGAGTGC
CTGGAATGA
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| Protein sequence | MASPPAGWPG YLPYTRKPHT LNSPATPFDF HRCLLACAQG DRRALQALYD HESARLLGVA
RRIARDDATA EDIVHDAIIR IWTRAASYDP ARGSARGWIY SITRHLALNS IRDTRRETVL
TDADTETAST LHGRIDDLEL WSGSAKIYRC LEQLQPAPQR CILHAYVDGC SHAEIAGLLG
APLGTVKAWI KRSLKALREC LE
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