Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_2671 |
Symbol | |
ID | 5191614 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 3053582 |
End bp | 3054613 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640587123 |
Product | helix-turn-helix domain-containing protein |
Protein accession | YP_001267989 |
Protein GI | 148547887 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCTGCCC TCGTCCGCGC CGCCAGCTTG ACCAACTACC TGGAGGTGTC TCGCCACCTG GGTCTGAACC CCCACAAACT GCTGGCACAG GTGGGCCTCA GCGCGGCGTT GCTTAACGAC CCCAACCGGC GTATCCCGGT GGCCAGCGTG ATCAACCTGC TGGAAGCTTC CGCCAGCGCC AGCCAATGCG AGAGCTTCGG CTTGCGCATG GCCGAACTGC GCCAGTTGTC GGACTTCGGC GAAATCAGCC TGCTGCTCAG CCACCAACGC AACCTGCGCG ATGCGCTGCA GGTGATCGTG CAGTACCGCC ATCTGCTCAA TGACGCGCTG GCCATTCATA TCGAAGAAGC TGGCAAGACC GTGGTCATTC GCGAAGAGGT GATCAGCGAG CGCGCGCCCT GTAGCCGCCA GGCCACCGAG CTGGCTATCG GCGTGATGAT GCGCTTGTGC GCGGCGCTGC TAGGCACGCA CTGGCACCCG ATCAGCGCCA ATTTCACCCA TGCGGCCCCC GCCGACCCCG CCATTCACCG GCGCATTTTC GGCTGCACGC TGGTGTTTGG CAGCGAGTTC AACGGCATCG TCTGCCCTGC CGCCGACCTC GACAGTGCCA GCCCGCAAGC CAACGAAGCC ATGGCCCGGC TGGCGCGGCG CTACCTGGAC ACGCTGCCAG CAGGCAGCGA ACCATCGCTG GAGCTGGAGT TGCGCAAGAC CATCTACCTG CTGCTGCCCA TGGGGCGGGC CACCCTCGAG CAAGTGGCGC AAACCCAGGG CATGAACGTA CGCACGCTGC AGCGGCGGCT GGAGGAAAGC GGGTTGACCT TCAAGGACCT GATCAACAGC GTGCGACGTG ACCTGGTGAT GCGCTACCTG GAGAACCCCA GCTATTCGCT GGGTCGCATT GCCGATATGC TCGGCTACTC GATGCCCAGT TCGTTCACCC GCTGGTTCAT CGCCCAGTAC GGCATGCCGC CGGCCAGCTG GCGGGCAAGC AGTGTCAGCC CTGCTCCCCA AACCCGTCAC TATCGAGGGT GA
|
Protein sequence | MPALVRAASL TNYLEVSRHL GLNPHKLLAQ VGLSAALLND PNRRIPVASV INLLEASASA SQCESFGLRM AELRQLSDFG EISLLLSHQR NLRDALQVIV QYRHLLNDAL AIHIEEAGKT VVIREEVISE RAPCSRQATE LAIGVMMRLC AALLGTHWHP ISANFTHAAP ADPAIHRRIF GCTLVFGSEF NGIVCPAADL DSASPQANEA MARLARRYLD TLPAGSEPSL ELELRKTIYL LLPMGRATLE QVAQTQGMNV RTLQRRLEES GLTFKDLINS VRRDLVMRYL ENPSYSLGRI ADMLGYSMPS SFTRWFIAQY GMPPASWRAS SVSPAPQTRH YRG
|
| |