Gene Pput_2667 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_2667 
Symbol 
ID5191272 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3048312 
End bp3049307 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content68% 
IMG OID640587119 
Producthypothetical protein 
Protein accessionYP_001267985 
Protein GI148547883 
COG category[R] General function prediction only 
COG ID[COG4447] Uncharacterized protein related to plant photosystem II stability/assembly factor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.166994 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGTCT TCAAACGATG CAGCGTGGTG ATGCTGGCCC TGGTTGCGCT GCAGGGTGCA 
GCCTTGGCTG CGCCATTCAC CGATGTGCTG GATGTGCCCG CCATGCCCAG CGCCCTTGCC
AGCAGCAGCG CCCTGCGTGA TGTGACCTTG GCCGGGCAGC GCCTGGTCGC GGTCGGCCCG
CGCGGGCACA TTCTGTATTC CGATGACCAC GGCGGGCACT GGCAGCAAGC CCAGGTGCCG
GTCAGCGCCG ACCTGAATGC GGTGAGCTTC GCCACGCCCG AACTGGGCTG GGCGGTGGGC
CACGACGGCG TGGTCCTGCA CAGCCGTGAC GGTGGCATGC ACTGGCAAAA ACAGCTGGAC
GGCCGGGTAC TGGCCGAACA GCTGCCAGGC GCGGACACCG ACAATGCCTT GCTCGACGTG
TGGTTCGGCG ATGCCCGCAC GGGCTACGCG GTGGGGGTGT TCAACCTGCT GCTTCGCACC
ACGGATGGCG GCAAGCACTG GCAGCCGTGG CTCGACCACA GCGACAACCC GCAAGGCCTG
CACCTGACCA GCCTGGCCGC GGTGGGCGAC GAGTTGTTCA TCACGGGCGA GCAGGGCCTG
TTGCTGAAGT GGGACGGCAA GCGCTTCGCT CGCGTTGGCA CACCCTACGC CGGCACCCTG
TTCGGTGCTG TCGGCAAGCC CGGCGTGCTG CTGATATACG GCCTGCGCGG CCACGCCTAC
CGCAGTACCG ATGGCGGCCA GCAGTGGCAA CTGATCGACA CCGGGATCAA CGCCAGCCTC
ACCGCCGCCG GTATCGACCG TGACGGGCAA TTCTGGCTTG CCAGCCAGGC CGGTGACCTG
CTGCTCAGCC GCGATGACGG CGCCAGCTTC AGCCCGGTAC CCCACAGCCC CCGCAGCCCA
GTCACCGCAC TCGTCAGCGA TGCCGGTAAC GGCCTGGTGC TGGTGGGCGA GCGGGGCACG
CGCAACCTGG CCGGTAACCC CACGCTGCAC CCCTGA
 
Protein sequence
MSVFKRCSVV MLALVALQGA ALAAPFTDVL DVPAMPSALA SSSALRDVTL AGQRLVAVGP 
RGHILYSDDH GGHWQQAQVP VSADLNAVSF ATPELGWAVG HDGVVLHSRD GGMHWQKQLD
GRVLAEQLPG ADTDNALLDV WFGDARTGYA VGVFNLLLRT TDGGKHWQPW LDHSDNPQGL
HLTSLAAVGD ELFITGEQGL LLKWDGKRFA RVGTPYAGTL FGAVGKPGVL LIYGLRGHAY
RSTDGGQQWQ LIDTGINASL TAAGIDRDGQ FWLASQAGDL LLSRDDGASF SPVPHSPRSP
VTALVSDAGN GLVLVGERGT RNLAGNPTLH P