Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_2667 |
Symbol | |
ID | 5191272 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 3048312 |
End bp | 3049307 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640587119 |
Product | hypothetical protein |
Protein accession | YP_001267985 |
Protein GI | 148547883 |
COG category | [R] General function prediction only |
COG ID | [COG4447] Uncharacterized protein related to plant photosystem II stability/assembly factor |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.166994 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGTCT TCAAACGATG CAGCGTGGTG ATGCTGGCCC TGGTTGCGCT GCAGGGTGCA GCCTTGGCTG CGCCATTCAC CGATGTGCTG GATGTGCCCG CCATGCCCAG CGCCCTTGCC AGCAGCAGCG CCCTGCGTGA TGTGACCTTG GCCGGGCAGC GCCTGGTCGC GGTCGGCCCG CGCGGGCACA TTCTGTATTC CGATGACCAC GGCGGGCACT GGCAGCAAGC CCAGGTGCCG GTCAGCGCCG ACCTGAATGC GGTGAGCTTC GCCACGCCCG AACTGGGCTG GGCGGTGGGC CACGACGGCG TGGTCCTGCA CAGCCGTGAC GGTGGCATGC ACTGGCAAAA ACAGCTGGAC GGCCGGGTAC TGGCCGAACA GCTGCCAGGC GCGGACACCG ACAATGCCTT GCTCGACGTG TGGTTCGGCG ATGCCCGCAC GGGCTACGCG GTGGGGGTGT TCAACCTGCT GCTTCGCACC ACGGATGGCG GCAAGCACTG GCAGCCGTGG CTCGACCACA GCGACAACCC GCAAGGCCTG CACCTGACCA GCCTGGCCGC GGTGGGCGAC GAGTTGTTCA TCACGGGCGA GCAGGGCCTG TTGCTGAAGT GGGACGGCAA GCGCTTCGCT CGCGTTGGCA CACCCTACGC CGGCACCCTG TTCGGTGCTG TCGGCAAGCC CGGCGTGCTG CTGATATACG GCCTGCGCGG CCACGCCTAC CGCAGTACCG ATGGCGGCCA GCAGTGGCAA CTGATCGACA CCGGGATCAA CGCCAGCCTC ACCGCCGCCG GTATCGACCG TGACGGGCAA TTCTGGCTTG CCAGCCAGGC CGGTGACCTG CTGCTCAGCC GCGATGACGG CGCCAGCTTC AGCCCGGTAC CCCACAGCCC CCGCAGCCCA GTCACCGCAC TCGTCAGCGA TGCCGGTAAC GGCCTGGTGC TGGTGGGCGA GCGGGGCACG CGCAACCTGG CCGGTAACCC CACGCTGCAC CCCTGA
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Protein sequence | MSVFKRCSVV MLALVALQGA ALAAPFTDVL DVPAMPSALA SSSALRDVTL AGQRLVAVGP RGHILYSDDH GGHWQQAQVP VSADLNAVSF ATPELGWAVG HDGVVLHSRD GGMHWQKQLD GRVLAEQLPG ADTDNALLDV WFGDARTGYA VGVFNLLLRT TDGGKHWQPW LDHSDNPQGL HLTSLAAVGD ELFITGEQGL LLKWDGKRFA RVGTPYAGTL FGAVGKPGVL LIYGLRGHAY RSTDGGQQWQ LIDTGINASL TAAGIDRDGQ FWLASQAGDL LLSRDDGASF SPVPHSPRSP VTALVSDAGN GLVLVGERGT RNLAGNPTLH P
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