| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2656 |
|---|
| Symbol | |
|---|
| ID | 5191579 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 3036694 |
|---|
| End bp | 3037317 |
|---|
| Gene Length | 624 bp |
|---|
| Protein Length | 207 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640587108 |
|---|
| Product | lysine exporter protein LysE/YggA |
|---|
| Protein accession | YP_001267974 |
|---|
| Protein GI | 148547872 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1280] Putative threonine efflux protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACCTTT CAAGCCTGCT GCTTTTCATC CCTGCCTGCT TCGCCTTGAA CATGGCGCCT
GGACCCAACA ACCTGTTGTC ACTGCACAAC GCCAGCCGTT ACGGCCTGCG CACCGCCTGT
GTGGCCGGCG CCGGCCGTAT CCTTGCCTTC TGCGGCATGA TCGCCCTGGC AGCGATGGGC
CTGGCAGTGG TGTTGCATAC CAGCGAATAC CTGTTCCTGG CCATCAAGGT GGTGGGCGCG
GCCTACCTGT TCTACATCGC CTGGCAACTG TGGCGCGCAC CCGTGAGCGA GACCGTGGTG
GCAAGCGATC ACCCAGGCGG CACTTGGCGC CTGGCGCGCC AGGAGTTCTG GGTGGCGGCC
GGCAACCCCA AGGCCATCCT GATCTTCACC GCCTTCCTGC CGCAGTTCGT CTCGGTCGGT
AGCAGCACCC CGGTGAGTGA GCAGTTCCTT TGGCTGGGTG TGTTGTTCCT GCTGCTGGAA
TGGGCGGCCA TCGCCATCTA CTCAGGCCTG GGCGCCTACA TGCAGCGCTG GTTCAGCCAG
CCCGGCCCAC GCCGGATGTT CAACCGGGTC AGCGCTTCCT TGCTGGGTTG CGCGGGCCTC
GGTCTGCTGG CTGCGCGCCG CTAG
|
|---|
| Protein sequence | MDLSSLLLFI PACFALNMAP GPNNLLSLHN ASRYGLRTAC VAGAGRILAF CGMIALAAMG
LAVVLHTSEY LFLAIKVVGA AYLFYIAWQL WRAPVSETVV ASDHPGGTWR LARQEFWVAA
GNPKAILIFT AFLPQFVSVG SSTPVSEQFL WLGVLFLLLE WAAIAIYSGL GAYMQRWFSQ
PGPRRMFNRV SASLLGCAGL GLLAARR
|
|---|
| |