| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2655 |
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| Symbol | |
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| ID | 5191578 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 3034238 |
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| End bp | 3036697 |
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| Gene Length | 2460 bp |
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| Protein Length | 819 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640587107 |
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| Product | outer membrane autotransporter |
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| Protein accession | YP_001267973 |
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| Protein GI | 148547871 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3468] Type V secretory pathway, adhesin AidA |
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| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain
[TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCTAC GCCTGATGCT GACCCTGGGT TCGCTCCCGC TGCTGGGCAT GGTCACGCCC
GCCCAAGCAA ATTGCACCTT CGCACCCGGC CCGGGTAACG ACACCTACAC CTGTGACAGC
GGCACCGCAC CCGCGTTGGT GGACAGCAGC GGCGATAACC GCCTGGTATT CCCGGCATCC
GGTAGCGGCG CCATTACCGG CGACGTAACC TTCGGCGCCG GCACAGACAG CATCGACATG
GGCTCTGGCA GCATCGGCGG CAACGTCAAC CAGGGCGCCG GCATCGATGA CTTCGTCATG
AGCGGCGGCG TCATCGAAGG CAACCTCAAC CAGGGTGATG GCCTGGACAC CTTTCACATG
AGCGGCGGCT GGATCAAGGG CACGTTCGAC AGCGGCGACT ATGCCGAAAT GGACGACGGA
CGTATCGGCA ACGTCAACAT GCGGCTGGAC GAGAACACCT TCATCATGCG TGGCGGCAGC
GTCGACCGGA ACGTCATCGC GGCCTTCGAC AAGGACTACA TCGAAGTCTT CGAGGGCAAC
ATCGGCGGCA ACATCAGCGT CAGCGGTGGC GACGACCAGG TGCTGGTGCA CGGTGGCCAG
GTTGGCGGCG ATGTGTTGCT GAGCTCTGGC AACGACCGCT TCACCTGGGA CGGTGGCCGT
ATTGGCGGGC GCGTGGATGC CGGGCCAGGT GATGACACGG CACTGCTCAA AGGCCTTACG
CCCGAGGTGC TGAGTATCAC GTTGGACGGC GGCGAAGGTA ACGACAGCCT GACGTTCGAT
GCCAGCCAGC CGACAGGCGG TGCCCACTAT GTGAATTGGG AGCGCGTGGC GCTGAACAAC
GGCAGCCGGC TGGTACTGGA TGACACGCTG GTAATGGGCG ACAGCAACAG CAGCACGGGC
AGCCTCGCCC TCGACGCCAG CAGCCGCATC ACGTCACGCC AAGGGGTGAT CACTGCGTTT
GCCCCTGGCC AGCGCGCCGC AATCAGCAAC GCAGGCACAC TTGACCTCAC CGCCGGCAAT
GATGCCATGG GCCGCTTGCG CATCGAGGGC GATTACACCG GCATCAACGG CACCCTGCGC
CTGAACAGCG TGCTGGCCGG CGATGGCGCT GCTTCCGATC GCCTGGTGGT CAGCCGCGGC
GCCATCGCCG GCTCTACCCA GGTGCTCATC AACAACCTCA ACGGCGCAGG TGCGGCGACG
GCGCAGAACG GCATCCAGGT GGTCGAAGCC CGTGACGGCG CCACCAGCAC GGCCACCGCC
TTTGTACAGA CCCAAAGGCT ATCGGCCGGA GCCTACGACT ATCGGCTGTT CAAAGGGGGC
GTCACTGCCG GCAGTGAAAA CAGCTGGTAC CTGCGCTCGA CGCTGGTTGC GCCACCCGCC
CCAGCCCCTG TGCCGGCACC GGGCGAGCCG CCAGTGATCG CCCCGGCCGT CACCCCACCC
GTCGCTGCGC CAGCGCCCGG CCAGGCCGAG CTGCCTGCCC CAGTGCAGGG CGAAAGCCTG
CCACTGTACC GCCCCGAGGT CCCGGTTTAT GCCGCAGCGC CACGGGGTGC CGCGATCATC
GCCCGTCAGG CATTGGGCAC CTTCCACCAA CGCCAGGGCG ACCAGCTGTT ACTGCAGGGT
GAAAGCGCCC TGCCCGCCAG CTGGGGGCAA GCCTACGGCG GCACGCTGCG CCAGCAATGG
AGCGGCACGG TCAGCCCGAG CCTGGATGGC GACCTGTACG GTTTCAAGGT GGGCCAGGAC
CTGTATGCCA AGGTTGGCGA CAACGGTTAC CGCCAGCATG TCGGTATCTA CGTAAGCCAT
AGCCGTCTGG ACGCCGACGT CAAAGGGTTT GCCCTGGCCG TTCACGACCG CAGCGTGGGC
GACCTGAAGC TCGATGGCGA TAGCGTGGGC ACCTACTGGA CGCTGGTCGG GCCACAGGGC
GCGTACCTGG ACGCGGTGTT GCAGTACACC CGCCTGGATG GCCGCGCCCG CTCCGAGCGT
GGCGACACGC TGAACCTCGA CGGCCACGCC TGGACAGCTT CACTGGAATC GGGCTACCCC
ATCACCCTGT CCGAGCACTG GCGCGTGGAA CCGCAAGCTC AGCTGATTGC GCAAAAGGTC
GCGCTGGACA GCGCCAGCGA CGGCGTCTCG CGTATCAGTC ATGACGCCCA GGTCGAGCTG
ACCGGCCGCT TGGGCCTGCG CCTGGAGGGT GCGTTCACGG GGAGCAGCGG GCGCCTGTTG
CAGCCCTTTG CGCAGGTCAA CCTGTGGCAC GGCGACGGTG GGCGCGACAC CTTGAGCTTC
GATGACGCAG ACAAGATCAA GACCGATTAC CGCTATACCT CAGTGCAACT GGAAAGCGGT
GTGGTCGCGC AGGTCAACGA AGCGCTGAGC CTGCATGGCG GCGTGCAGTA CACCGCCAAC
CTGGACAGCC GCCAGCAGGA AGCCAGCGGC GTTAACCTGG GCGTGCGCTG GCAGTTCTAG
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| Protein sequence | MRLRLMLTLG SLPLLGMVTP AQANCTFAPG PGNDTYTCDS GTAPALVDSS GDNRLVFPAS
GSGAITGDVT FGAGTDSIDM GSGSIGGNVN QGAGIDDFVM SGGVIEGNLN QGDGLDTFHM
SGGWIKGTFD SGDYAEMDDG RIGNVNMRLD ENTFIMRGGS VDRNVIAAFD KDYIEVFEGN
IGGNISVSGG DDQVLVHGGQ VGGDVLLSSG NDRFTWDGGR IGGRVDAGPG DDTALLKGLT
PEVLSITLDG GEGNDSLTFD ASQPTGGAHY VNWERVALNN GSRLVLDDTL VMGDSNSSTG
SLALDASSRI TSRQGVITAF APGQRAAISN AGTLDLTAGN DAMGRLRIEG DYTGINGTLR
LNSVLAGDGA ASDRLVVSRG AIAGSTQVLI NNLNGAGAAT AQNGIQVVEA RDGATSTATA
FVQTQRLSAG AYDYRLFKGG VTAGSENSWY LRSTLVAPPA PAPVPAPGEP PVIAPAVTPP
VAAPAPGQAE LPAPVQGESL PLYRPEVPVY AAAPRGAAII ARQALGTFHQ RQGDQLLLQG
ESALPASWGQ AYGGTLRQQW SGTVSPSLDG DLYGFKVGQD LYAKVGDNGY RQHVGIYVSH
SRLDADVKGF ALAVHDRSVG DLKLDGDSVG TYWTLVGPQG AYLDAVLQYT RLDGRARSER
GDTLNLDGHA WTASLESGYP ITLSEHWRVE PQAQLIAQKV ALDSASDGVS RISHDAQVEL
TGRLGLRLEG AFTGSSGRLL QPFAQVNLWH GDGGRDTLSF DDADKIKTDY RYTSVQLESG
VVAQVNEALS LHGGVQYTAN LDSRQQEASG VNLGVRWQF
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