| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2625 |
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| Symbol | |
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| ID | 5191564 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 2994133 |
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| End bp | 2995953 |
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| Gene Length | 1821 bp |
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| Protein Length | 606 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640587077 |
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| Product | hypothetical protein |
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| Protein accession | YP_001267943 |
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| Protein GI | 148547841 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3519] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03359] type VI secretion protein, VC_A0110 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGACG AACTGCTGCC CTACTACGAA AAGGAACTGT CGCACCTGCG CTTTCTCGGC
CAGGAGTTTG CCGCGCAGTA CCCGAAGATC GCTTCGCGGC TGCTGATCGA GGGCGACAAC
TGCGAAGACC CGCACACCGA GCGCCTGATC GAGGCGTTCT CGTTCCTGTC TGCGCGGGTG
CACAAGAAGC TCGATGACGA GTTTCCGGAA ATCGTCGAAT CCTTCCTCGA GGTGCTGTAC
CCCCACTACC TGCGCCCTAC TCCGTCGATG TCGATTGTCG AACTGAGCCT GGGCAGGCAC
GAAAAAGTCA CCGAAGCCTA CCGCGTGGCG CGCCATACCG AGATGCATGC CAATCCCGTG
GAGGGCGTGG TGTGCAAGTT CCGCACCTGC TACCCGGTAG AGCTGTGGCC GATTGCCGTG
CAGCAGGCCT CGTTCACAGA AATGGAACGT TCGGCCTTCA ACGGGCACAG CGCCGACCTG
GTCGCTCATC TGCGCATTCG CTTGGCTGCC ACGGGCGATG CCCTGTTCGG GCAGATGGAC
ATGAACCGCC TGCGGTTCTT CCTCGACGGC GAAGCAACCC TGATGCTGCA GCTGTACGAG
CTGCTGTTCA ACAACCTGGC CAAGGCCACG CTGAGCTTCG ACGACCAGGG CCGCCGCCGC
GAAGTGGCGC TGCCGGCCGA TGCCCTGAAC ACCGTGGGCT ACGCCCGTGA CGAAGGCCTG
GTGGACTACT CCGAGCGCTC ATTCCTGGGC TACCGCCTGC TGCACGAGTA TTTCACCTTC
CCCGACAAGT TCATGTTCTT CGACCTCAGT GGATTTGCCC GTATCCTGCA GGGCAAGGCC
ATCGAACATG TAGAGGTCAA CTTCTATTTC TCCGACTACG ACCTCAGCGA GCGCCTGGCG
CGGCTGACCC AGAACATCGG GCGCAACAAC TTCAAGCTCA ACTGCACGCC GATCATCAAC
CTGTTCCGCC AGCAGGCCGA GCCGATCAAG CTGACCCACA CCCAGCACGA ATACCCGGTC
ACCCCTGACA CACGGCTGCA CAACGCTGCA GAAGTGGTAT CGATCGACCG GGTACGGCGG
GTGCGCAAAC TCGGCGGTAT CGACCAGGTC GCCACCTGCC AGCCGTTTTT CGAACCCCGG
GGCGAGCAAG ACCCACACAG CAGCTTCTGG GTCGCGCGCC GGCGAAACCA GGGTGACGCC
ACTGCCATGA GCATCCGCGT GGTCGACCGC GATCTGGAAT TGATCGACGC CAGCAGCGAC
ACCCTCAGCA TCGGCCTTAC CTGCAGCAAC CGCGACGTGC CGCTGCTGCT GCCGTTCGGT
GGCGAACGGG GCGATTTCAC CATTCCCGCC AACTCGGTGA TCAAGGACAT CCGCTGCCTG
CGCAAGCCCA CCGCCACGGT GCGCGTGCCC TTGGGCAAGG GCCTGATCTG GCGGTTGATC
GCCCACTTGT CGCTGAACCA CCTGTCCCTG GTCAGCCAGG GCCGCGAAGT GCTGCTGGAG
CTGTTGTCGC TGTACAACTA CCGCAATGTT TCCGCCATTC GCAAACAGAT CAACGGCATC
AAGGCGATCA GCAGCGAACC GGTGGTCGCG CGCATCGGCC ACCCGCGGCC AAATTTCGTG
CGCGGGGTCG GCATCACCCT GACCCTGGAC GAAAGCCAGT TCATCGGCAG CGGCGTGTTT
CTGTTCGGCA AAGTGCTGGA CCACTTCTTC GGCCAGTACT GCTCGATGAA CAGCTTCACC
CAACTGACCC TGCGCACCCA ACAACGAGAA AAGAGAGTCG TACAATGGCC AGCACGCACC
GGCGATCAGC CCCTGGTCTG A
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| Protein sequence | MLDELLPYYE KELSHLRFLG QEFAAQYPKI ASRLLIEGDN CEDPHTERLI EAFSFLSARV
HKKLDDEFPE IVESFLEVLY PHYLRPTPSM SIVELSLGRH EKVTEAYRVA RHTEMHANPV
EGVVCKFRTC YPVELWPIAV QQASFTEMER SAFNGHSADL VAHLRIRLAA TGDALFGQMD
MNRLRFFLDG EATLMLQLYE LLFNNLAKAT LSFDDQGRRR EVALPADALN TVGYARDEGL
VDYSERSFLG YRLLHEYFTF PDKFMFFDLS GFARILQGKA IEHVEVNFYF SDYDLSERLA
RLTQNIGRNN FKLNCTPIIN LFRQQAEPIK LTHTQHEYPV TPDTRLHNAA EVVSIDRVRR
VRKLGGIDQV ATCQPFFEPR GEQDPHSSFW VARRRNQGDA TAMSIRVVDR DLELIDASSD
TLSIGLTCSN RDVPLLLPFG GERGDFTIPA NSVIKDIRCL RKPTATVRVP LGKGLIWRLI
AHLSLNHLSL VSQGREVLLE LLSLYNYRNV SAIRKQINGI KAISSEPVVA RIGHPRPNFV
RGVGITLTLD ESQFIGSGVF LFGKVLDHFF GQYCSMNSFT QLTLRTQQRE KRVVQWPART
GDQPLV
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