| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2622 |
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| Symbol | |
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| ID | 5190825 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 2991568 |
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| End bp | 2992107 |
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| Gene Length | 540 bp |
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| Protein Length | 179 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640587074 |
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| Product | hypothetical protein |
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| Protein accession | YP_001267940 |
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| Protein GI | 148547838 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3516] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03358] type VI secretion protein, VC_A0107 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAAGA AGGAAAGCAC TCAGCACAAA CTCGACCGCG TTCGCGCGCC TCGGGTCCAT
ATCACCTACG ACGTGGACAT CGGCGATGCC ATCGAGAAAA AGGAGCTGCC CTTCGTCGTC
GGCGTACTGG GTGACTTCTC CGGCAACCCG CTGGAGCCGC TGCCCAAGCT CAAGGACCGC
AAGTTCGTGT ACATCGACCG CGACAACTTC AACGGTGTGC TCAAGGGCAT CAAGCCACGC
CTGACCTACC GCGTCGACAA CACCCTGGCC AAGAACGGTA CCCAGTTGGG CGTGGAGCTG
AACTTCAACA GCCTCGAAGA TTTCGAGCCA CAGAACGTGG TCAAGCAGGT CGAGCCGCTG
CGCAAGCTGC TGGAAGTGCG CAACAAGCTG GCCGACCTGC GCAACAAGAT GGGCGGCAAC
GACAAGCTCG AAGAGCTGCT GATGGACGTG CTGCAGAACA CCGAAAAGCT CAAGACCTTG
GGCAAGGAAT TCGGCCGTGA AGCCGAAGTG AAAGACCCGT CCAGCGACGA TCGCGCCTGA
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| Protein sequence | MAKKESTQHK LDRVRAPRVH ITYDVDIGDA IEKKELPFVV GVLGDFSGNP LEPLPKLKDR
KFVYIDRDNF NGVLKGIKPR LTYRVDNTLA KNGTQLGVEL NFNSLEDFEP QNVVKQVEPL
RKLLEVRNKL ADLRNKMGGN DKLEELLMDV LQNTEKLKTL GKEFGREAEV KDPSSDDRA
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