| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2611 |
|---|
| Symbol | |
|---|
| ID | 5192093 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 2975103 |
|---|
| End bp | 2976278 |
|---|
| Gene Length | 1176 bp |
|---|
| Protein Length | 391 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640587064 |
|---|
| Product | amidohydrolase |
|---|
| Protein accession | YP_001267930 |
|---|
| Protein GI | 148547828 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase |
|---|
| TIGRFAM ID | [TIGR01891] amidohydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.234689 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCGAC ATCAGCATAT CCAGGCCTGG CTCGCCGACG TGGCCAGCGA CCTGCAAGCG
ATCCGTCACG ATATCCACGC TCACCCGGAA CTGGGCTTTG AAGAAAGCCG CACCTCGGCA
TTGGTCGCCC GACTGCTGGA GGCATGGGGC TATGAAGTGC ACACCGGTAT CGGCAAGACC
GGCGTGGTCG GCGTGCTGCG CAATGGCAGT AGCCCCCGCC GGCTGGGCCT GCGCGCCGAC
ATGGACGCGC TGCCCATCCA CGAAGCATCG GGTGCGGCAT ACAGCAGCCA GCACCCAGGC
TGCATGCACG CCTGTGGTCA TGACGGGCAC ACCACCATGC TGCTTGGCGC CGCACGCTAC
CTGGCGGCCA CCCGGCAGTT CGACGGCACG CTGACACTGA TCTTCCAGCC GGCCGAGGAG
GGCCAGGGCG GGGCCGAGGC GATGCTGGCC GACGGCCTGT TGGAGCGCTT CCCATGTGAT
GCGCTATTCG GCATGCACAA CATGCCAGGG CTGCCGGCCG GGCACCTGGG GTTTCGTGAA
GGGCCGATGA TGGCTTCGCA AGACCTGCTG ACGGTGACCC TGGACGGGTT GGGTGGCCAT
GGCTCGATGC CGCACCTGAC CGTCGACCCG CTGGTGGCGG CCGCCAGTGT GGTGATGGCG
CTGCAAACCG TGGTGGCGCG CAATATCGAT GCGCAGGAGG CGGCAGTGGT CACCGTCGGC
GCGTTGCAGG CCGGCGAAGC GGCCAACGTG ATCCCGCAAC AGGCGCTGTT GCGCCTTAGC
CTGCGCGCGC TGAACGCCGA GGTGCGCGCG CAGGCCCTTG AGCGGGTGCG GGCAATCATC
GTCAGTCAAG CCGAGAGCTT TGGCTGCCGC GCAAGCATCG AGCACCGCCC GGCCTACCCG
GTGCTGGTCA ACCATGCCGC TGAAAACGCC TTCGCCACCC AGGTAGGGGT CGAGTTGCTG
GGCGCCCAGG CAGTGGATGG CAACACCCGC AAGCTGATGG GCAGCGAAGA CTTCGCCTGG
ATGCTGCAGC GCTGCCCGGG GGCCTACCTG TTCATCGGCA ATGGTGTATC CCGGCCGATG
GTGCACAACC CGGCCTACGA CTTCAACGAC GACATCCTGC TGACCGGCGC CGCCTATTGG
GGCGCGCTGG CAGAGCGCTG GTTGGCACCT GCCTGA
|
|---|
| Protein sequence | MSRHQHIQAW LADVASDLQA IRHDIHAHPE LGFEESRTSA LVARLLEAWG YEVHTGIGKT
GVVGVLRNGS SPRRLGLRAD MDALPIHEAS GAAYSSQHPG CMHACGHDGH TTMLLGAARY
LAATRQFDGT LTLIFQPAEE GQGGAEAMLA DGLLERFPCD ALFGMHNMPG LPAGHLGFRE
GPMMASQDLL TVTLDGLGGH GSMPHLTVDP LVAAASVVMA LQTVVARNID AQEAAVVTVG
ALQAGEAANV IPQQALLRLS LRALNAEVRA QALERVRAII VSQAESFGCR ASIEHRPAYP
VLVNHAAENA FATQVGVELL GAQAVDGNTR KLMGSEDFAW MLQRCPGAYL FIGNGVSRPM
VHNPAYDFND DILLTGAAYW GALAERWLAP A
|
|---|
| |