| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2610 |
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| Symbol | |
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| ID | 5192092 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 2973709 |
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| End bp | 2975019 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640587063 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001267929 |
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| Protein GI | 148547827 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.241341 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGACTT CGAGCACCGG CGTGTCGCGT ACCCGGCAAG TGGTGGCCGC CGTTATCGGC
AACGCCCTGG AATGGTATGA CTTTATCGTG TATGGCTTTC TGGCCAGTAT CATCGCCCGG
CAGTTCTTCC CGTCCGACGA CGCGTACGCC TCGCTGCTGA TGGCCCTTGC CACCTTCGGC
GTCGGGTTTT TCATGCGCCC TGTGGGCGGC GTGCTGCTGG GCATGTATTC CGACCGCAAG
GGCCGCAAGG CGGCCATGCA GATGATCATC CGCCTGATGA CCGTGTCCAT CGCCATGATC
GCCTTCGCAC CCGACTACCT GGCCATCGGC ATGGCTGCGC CGCTGCTGAT CGTGGTGGCG
CGCATGCTGC AAGGCTTTGC CACCGGTGGT GAATACGCCA GCGCCACGGC GTTTCTGGTG
GAAAGCGCAC CTGCCCACCG CAAGGGCCTG TATGGTTCGT GGCAATTGGT AGGGCAGTGC
CTGGCGGTTT TTTCCGGGGC GGCAATGGTG GCGTTGGTTA CCCACCTGTG CTCGCCTGAG
GCGCTGGACA GCTGGGGCTG GCGCATCCCG TTCGTGCTGG GCTTGCTGAT CGGGCCGGTC
GGGCTGTGGA TCCGCAAGCA TATGGAGGAG CCTGAGGCGT TTGTCGAGGC GCGTCGCCAT
GCCAAGGGCC AGTCGCCCGG CCTGTGGCAG GTGCTGCGTG AACACCGGCG CAGCCTGCTG
GTGTCGATGG GGTTGGCCTG CGGCGCGACG GTATCGTTCT ACGTGGTGCT GGTGAACATG
CCGACCTTCG CCCACAAAAG CCTAGGCCTG CCGCTGGACC AGGTGCTGCT GGTGCAGATG
CTCGCCGTGG GGCTGATGAC CCTCGTGATT CCGTTGTCCG GGGCGCTGTC TGACCGGCTG
GGGCGGCGCC CGGTGCTGAT GGCCTTCACC CTGACGTTCT TCGTGATGGT CTACCCACTG
TATGTGTGGG TGGCCGCTGC GCCTTCCCTG GAGCGCCTGT TGGTCATGCA ACTGCTGTTG
TGCACGGCCA TCGGTGGTTT CTTCGGCCCG GCGCCTACTG CCCTGGCCGA ACAGTTCCCG
GTCCAGGTGC GTTCCACCGG CGTGTCGGTG GCCTACAACG TGGCGGTGAT GGTGTTCGGT
GGCTTTGCCC CGTTGATCGT GACCTGGCTC ACCCAGGTGC TCGGCACCCC AGTGGCGCCG
GCGTTCTACG TGCTGTTTGC CTGCCTGCTG ACATTGCTGG GCACCTATTG CCTGAAAGAA
GCACCGCGGG CAGTCAAGCC TGCCGCCTTC AACCTTGGAG TAAAACCGTG A
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| Protein sequence | MQTSSTGVSR TRQVVAAVIG NALEWYDFIV YGFLASIIAR QFFPSDDAYA SLLMALATFG
VGFFMRPVGG VLLGMYSDRK GRKAAMQMII RLMTVSIAMI AFAPDYLAIG MAAPLLIVVA
RMLQGFATGG EYASATAFLV ESAPAHRKGL YGSWQLVGQC LAVFSGAAMV ALVTHLCSPE
ALDSWGWRIP FVLGLLIGPV GLWIRKHMEE PEAFVEARRH AKGQSPGLWQ VLREHRRSLL
VSMGLACGAT VSFYVVLVNM PTFAHKSLGL PLDQVLLVQM LAVGLMTLVI PLSGALSDRL
GRRPVLMAFT LTFFVMVYPL YVWVAAAPSL ERLLVMQLLL CTAIGGFFGP APTALAEQFP
VQVRSTGVSV AYNVAVMVFG GFAPLIVTWL TQVLGTPVAP AFYVLFACLL TLLGTYCLKE
APRAVKPAAF NLGVKP
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