| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2605 |
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| Symbol | |
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| ID | 5191384 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 2967751 |
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| End bp | 2969466 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640587058 |
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| Product | putative succinate dehydrogenase |
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| Protein accession | YP_001267924 |
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| Protein GI | 148547822 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.265351 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATACGC GTAGCTGCGA TGTACTGGTC ATCGGTGCGG GTGCTGGCGG CCTGGCGACA
GCCATCACGG CGAAAAAGCT TGGCCTGGAT GTGATCGTCA TCGAAAAGGA GGCGTGCTTC
GGCGGCACCA CGGCGTTTTC CGGCGGCGTG CTGTGGGTGC CGGGCACCCG GCACGGGGGC
AATGACAGCC AAGCAGCGGC CATGACCTAC CTGCGCAACG AAACCGGTGC CTGCTTCGAT
GCGGCCGGGG TGGAGGCATT CTTGCGCTAC GCGCCGCAGA TGGTTGAGTT TTTCGAGCGC
GAGACGGCAG TCAAGTTCGT GCCCACGCTG TACCCCGATT ATCACCCGCA GGTGGAAGGC
GGCGTCGATG TGGGCCGCTC GATACTGGCC GCACCTTACG ACATCCGTGG TCTGGGGCCC
GACATGGCGC GGCTGCGCCC GCCGCTGAAG ACCATCACCT TCATCGGCAT GATGTTCAAC
TCGTCGAATG CCGACCTCAA GCACTTCTTC AATGTCACCC GTTCGTTGAC CTCGTTCGCC
TACGTGGCCA AACGCCTGCT GACCCATTTG AAGGAGCTGG CCTTGTACCG ACGCGGCACC
CAGGTCACCA GTGGCAATGC CCTGGCGGCA CGGCTGGTAC GCTCGGCACT GGACCTGGGC
ATTCCGATTC TCACAGGCAC CCCGGCGCGG CAGTTGCTGC GCGAAGGGGC GCGGGTAGTG
GGGGCGGTGA CCGGGCAGGC CGGCAGCGAG CAGCGCATCG AGGCCCGGCG TGGGGTGGTG
CTGGCCTGTG GCGGTTTCTC CCATGACCTG CAACGGCTGC GCCAGGCCTA CCCGCATGTA
CGGCGTGGCG GCGAGCATTT TTCACCGGTG CCAGCGGGCA ACACCGGCGA TGGCGCGCGC
ATGGCCGAGG CGCTGGGAGC AAAGGTCGAT ATCTGCCTGC AGGCACCTGC AGCCTGGATG
CCGGTGTCGA AGGTGCCGGT GGGTGGTGGG CGGCATATTG CCTTTCCGCA CTTGCTCGAC
CGCTACAAGC CGGGTGTGAT CGGCGTGCTG CGTTCGGGGC AGCGATTCAC CAATGAGTCG
AATGCCTACC ACGACGTGGG CGCAGCGCTG ATCGAGGCGT GTTCCGACCA GGCAGAAACC
GCCATGTGGC TGGTGTGCGA CCGCCGCACC CTGGCCAAAT ACGGGCTGGG CTTTGCCAAG
CCTGCGCCGA TGCCGCTGGG GCCATTGCTG CGCAACGGCT ACCTGCTCAA GGGCCAGACC
CTGGAGGAGT TGGCCGGCAA GGCCGGTATC GATGCGCAAG GGCTGGAGCA GACTGTGCGC
GAGTACAACC TTGGCGCTGT CCACGGCGAA GACCGTCAGT TCGGCCGCGG CAGCACCAGC
TTCAATCGCT ACCTGGCCGA CCCGCAGCAA CAACCCAACC CGTGCGTAGC GCCGGTTGGC
GAGGGACCGT ACTTTGCCGT GAAAGTGATC ATGGGCGATC TGGGCACTTT CGACGGGCTG
CGCACCCGTG TGACCGGTGA AGTGTTGGCG GCCGACGGGC AAGTCATCGA CGGCCTGTAT
GCGGTGGGTA ACGACCGCGC CAGCATCATG GGCGGCAACT ACCCCGGGGC GGGCATCACC
CTGGGGCCGA TCATGACCTT TGCCTACATC ACCGGGCGCC ATCTGGCGGG TGTCGAGCAG
GGGCTGGCGG CGGGCAACGC ACGGGAGGTG GCGTGA
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| Protein sequence | MNTRSCDVLV IGAGAGGLAT AITAKKLGLD VIVIEKEACF GGTTAFSGGV LWVPGTRHGG
NDSQAAAMTY LRNETGACFD AAGVEAFLRY APQMVEFFER ETAVKFVPTL YPDYHPQVEG
GVDVGRSILA APYDIRGLGP DMARLRPPLK TITFIGMMFN SSNADLKHFF NVTRSLTSFA
YVAKRLLTHL KELALYRRGT QVTSGNALAA RLVRSALDLG IPILTGTPAR QLLREGARVV
GAVTGQAGSE QRIEARRGVV LACGGFSHDL QRLRQAYPHV RRGGEHFSPV PAGNTGDGAR
MAEALGAKVD ICLQAPAAWM PVSKVPVGGG RHIAFPHLLD RYKPGVIGVL RSGQRFTNES
NAYHDVGAAL IEACSDQAET AMWLVCDRRT LAKYGLGFAK PAPMPLGPLL RNGYLLKGQT
LEELAGKAGI DAQGLEQTVR EYNLGAVHGE DRQFGRGSTS FNRYLADPQQ QPNPCVAPVG
EGPYFAVKVI MGDLGTFDGL RTRVTGEVLA ADGQVIDGLY AVGNDRASIM GGNYPGAGIT
LGPIMTFAYI TGRHLAGVEQ GLAAGNAREV A
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