Gene Pput_2604 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_2604 
Symbol 
ID5191383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp2967425 
End bp2967751 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content63% 
IMG OID640587057 
ProductNIPSNAP family protein 
Protein accessionYP_001267923 
Protein GI148547821 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.565176 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAAGC CTGTGGTCGA CCACCGCATC TACACCATTC GCCCGCGCGG CATGGCGGCC 
TTTCTCGAGG CGTTCGACCA GCTGGCGATG CCGATCCTGC TGCGCCACCT CGGTGCACCC
CTGGCGTTTT ACACCAGCAG CATCGGGCCG TTGAACCAGG TGGTGCACTT GTGGGGCTAT
GACAGCCTCG ATGACTTCGA GAAGCGCAGC GCAGCGCGGG ATGCCGACCC GGACTTTGCC
GCGTACCTGC ATGCCACCCG CGACCTGGTG GTGGCTCAGG AAACACGCAT CATAAGGCCT
GTGCGCTTAC CCAGCCTTTT CCACTAG
 
Protein sequence
MDKPVVDHRI YTIRPRGMAA FLEAFDQLAM PILLRHLGAP LAFYTSSIGP LNQVVHLWGY 
DSLDDFEKRS AARDADPDFA AYLHATRDLV VAQETRIIRP VRLPSLFH