Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_2601 |
Symbol | |
ID | 5192545 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 2964606 |
End bp | 2965223 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640587054 |
Product | LexA repressor |
Protein accession | YP_001267920 |
Protein GI | 148547818 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
TIGRFAM ID | [TIGR00498] SOS regulatory protein LexA |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.829125 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGCTCCA TGGACACTCT TACCCCCAAA CGCCGCGCCA TTTTCGAATT CATCCGTGAG CGCATTGCCG AGCATGGTCA GCCGCCGAGC CTGGCCGATA TCGCCACGCG CTTCGGTTTT GCCTCGCGCA GCGTTGCGCG CAAGCACATC ACCGCCCTGT GCCAGGCCGG TTACATCGAT GTCACGCCAA ACCAGGCCCG GGGCATACGC CTGGCCGAAC CGCTGCGCCG GCCAGAAATC CTCGAAATAC CCGTGCTGGG CCAGGTGGCG GCGGGTGCCC CCATCGGCCC GGACCTGGAC ATCCACGAGC AGTTGCTGCT CGACCCCAGC CTGTTCCGCC GTACCCCCGA CTACCTGCTG AAGGTGCGGG GCGACTCGAT GATCGACGAC GGCATCTTTG ACGGTGACCT GGTCGGCATC CTGCAACAGG CTGACGCCCG CGACGGGCAA ATCGTGGTTG CGCGCCTGGA CGGCGAAGTG ACCATCAAAC GCCTGCAACG CCAAGGCGGC ACTTACCGGC TGTTGCCACG TAACCCGGCC TATGCGCCGA TCGATGTGCA GCCCGAACAG GACTTTTTCA TCGAAGGCGT GTTCTGCGGC TTGCTGAGGC GCGACTGA
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Protein sequence | MCSMDTLTPK RRAIFEFIRE RIAEHGQPPS LADIATRFGF ASRSVARKHI TALCQAGYID VTPNQARGIR LAEPLRRPEI LEIPVLGQVA AGAPIGPDLD IHEQLLLDPS LFRRTPDYLL KVRGDSMIDD GIFDGDLVGI LQQADARDGQ IVVARLDGEV TIKRLQRQGG TYRLLPRNPA YAPIDVQPEQ DFFIEGVFCG LLRRD
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