| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2598 |
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| Symbol | dnaE2 |
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| ID | 5193212 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 2959484 |
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| End bp | 2962564 |
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| Gene Length | 3081 bp |
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| Protein Length | 1026 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640587051 |
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| Product | error-prone DNA polymerase |
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| Protein accession | YP_001267917 |
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| Protein GI | 148547815 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.254359 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACCC CGGGTTATGC CGAGCTGCAT TGCCTTTCCA ACTTCAGCTT CCAGCGCGGT
GCATCGAGCG CCGACGAGCT GTTCCGGCGT GCGCGCGAGC AGGGCTACCA GGCCTTGGCA
ATCACTGACG AATGCACGCT GGCCGGTATC GTGCGCGCCT GGCAGGCAGC CAAGGTGCAC
CAGTTGCGGC TGATCGTTGG CAGCGAGGTG CAATTGTGCG ACGGGCCCAA GCTGGTGCTG
CTGGTCGAGA ACCTGACCGG CTACCAGAAC CTGTGCGCGC TGATCACCCG TGCCCGGCGG
CGGGCAGAGA AGGGTGCGTA CCAGCTGTTT CGTGATGACC TGCTGCTGCA CCACCAAGGC
CTGCTGGCCT TGTGGGTGGC CGCTGACAGT GGCGATACCG CTACCGGCGC GTGGCTGCGC
AGTGTCTTCG CTGAGCGCCT GTGGCTGGCC GTGCACCTGC ACCGGGGCAG TGACGATGCC
ATGCGCCTGC AACGGTTGCG GGCACTGGCG GCTGATGTGG GTATCCGCGC CGTGGCCTGT
GGCGACGTGC ACATGCACGT GCGTGGTCGC CGTGCCTTGC AGGACTGCAT GACTGCCATC
CGCCAGCATT GCCAGGTGAG CGAGGCCGGG CGCTTTCTGT TTGCCAATGG CGAACGGCAC
CTGCGCAGCC AGGCGCAACT GGCCGAGTTG TATCCGCTCG ACCTGCTGGC CGAGACCTTG
GTCATCGCCC GGCGCTGCCA GTTTGACCTG AGCGAACTGA ACTACCAGTA CCCACGCGAA
CTGGTGCCCG AGGGGCATAC CCCGGCAAGC TGGCTGCGCG AACTGTGCGA GCAAGGCATG
CCGCTGCGCT GGCCAGGCGG GCCGAGTGGC AAAGTGCGGG CTGTGCTTGC CAAGGAACTG
GGGCTGATCG AAGAGCTGGG TTACGAAAGC TACTTCCTGA CGGTGCACGA CATTGTCGCC
TTCGCCCGCA GCCAGCGCAT CCTATGCCAG GGCCGGGGGT CGGCAGCCAA CTCGGTGGTG
TGCTTCGTGC TGGGCATCAC CGAGCTTGAC CCCATGAAAC ACCACCTGCT GTTCGAGCGC
TTCCTGTCGC GCGAGCGCAA CGAGCCGCCG GACATCGACG TGGACTTCGA ACACGACCGG
CGCGAGGAGG TGATCCAGTA TGTATTCCGT CGCTATGGCC GGCACCGGGC GGCGCTCACT
GCGGTAGTCA ACACCTACCA TGCCGCCGGT GCGGTGCGGG ATGTGGCGCG GGTGCTCGGG
CTACCTGCCG ACCAGGTGGA TGCCCTGGCC AAATGTTGTG GCCGCTGGAG CGATCGCATA
CCCGATGACC AGCGCCTGGC CGAGGCCGGT TTCGAAGCGG GCAGCCCTTC GCTGCGGCGG
GTGCTGGTGC TGGCCGGCGA ACTGATCGGC TTCCCTCGAC ACCTGTCACA GCACCCGGGC
GGTTTTGTCA TCTCCCAGCA ACCGCTCGAC CAGCTGGTGC CGGTGGAGAA TGCCGCGATG
CCGGAGCGTA CGGTGATCCA GTGGGACAAG GATGACCTGG ACATGGTTGG CCTGCTCAAG
GTCGACGTAC TGGCGTTGGG CATGCTCAGC GCCTTGCGTC GCTGCTTCGA CCTGCTGCAG
CACCACCGTG GCCGGCACCT GACCCTGGCG ACCATCCCCA GCGAAGACCC GGCCACCTAC
GCCATGATCA GCCGTGCCGA GACCATGGGC GTGTTCCAGA TCGAGTCACG CGCGCAAATG
GCCATGTTGC CGCGGCTGCG GCCCCAAAAG TTCTACGACC TGGTCATCGA GGTCGCCATT
GTCCGCCCAG GGCCGATTCA GGGCGACATG GTCCACCCGT ACCTGCGCCG GCGCCTGAAG
CAGGAGCCGG TGACGTATCC GTCGCCGCAA CTGAAGGAAG TGTTCGAACG TACCTTGGGC
GTGCCGCTGT TCCAGGAGCA GGTGATGGAG CTGGCGATGG TCGCGGCCGA CTATACCCCG
GGCGAGGCCG ACCAGTTGCG CCGCAGCATG GCAGCCTGGA AGCGCCACGG CGGGCTTGAA
CCGCACCGCG AACGGCTGGT GCAGGGCATG TTGCGCAATG GTTACACGCT GGCGTTTGCC
GAGCGCATCT TCGAGCAGAT CAAGGGGTTT GGCAGCTATG GCTTCCCTGA GTCGCATGCG
GCCAGCTTTG CCTTGCTGTG CTATGCCAGC AGTTGGCTGA AGTGCCATGA GCCGGCGATC
TTCACCTGTG CGTTGGTCAA CAGTTGGCCG ATGGGCTTCT ACAGCCCTGA TCAGCTGCTG
CAAGAGGCTC GCCGCCAAGG TATCGAGGTA CGGCCGGTTG ATGTCTGCCA CAGCGACTGG
GACTGCACCC TGGAGCCTGA TGCTGAAGGC ACCCTGGCCA TTCGCATGGG CCTGCGACTG
GTACGTGGCC TGGCCGAAAC CGATGCCAGG CGCGTGCAGC AGGCGAGGGC GCAGCGGCCG
TGGCGCAACG TCGAAGACCT GTGCCTGCGC GCCGGCCTGG ACGCACGGGC CCGTGCCCGC
CTGGCTGATG GCGGGGCGCT GCGCGCCTTG GCCAGCGATC GGCATCAGGC GCGCTGGCAG
GTGGCGGCGG TGCAGCCGCA GCTGCCGTTG TTCGCCGATG TGCAGGCCTT GCCTGAAGAA
CCGGTGCAAT TGCCCGTGCC AACCGTGGGC GAGGACCTGA TGGCCGATTA TCAAACCCTC
GGCACTACGC TTGGCCCACA TCCACTGGCG CTGTTGCGTT CTCGCCTGAG GGCACTGGGG
TGTCGCAGCT CCAGTGAATT GCAGGGTGTG GAGCATGGCG ACAACATTGC CGTGGCCGGG
CTGGTGGTGG GCCGGCAACG GCCTCAAACC GCCAGCGGTG TGACCTTCGT TACTTTGGAA
GACGAACATG GCATGGTCAA CGTGGTGGTG TGGCGTGCGC TGGCCGAACG GCAGCGACGG
GCGCTGGTGG GTTCGCAGCT GCTCAAGGTC AGTGGGCGGT TGGAGCAGGA GAATGGGGTG
CGGCACCTGA TTGCGCGGCG GTTGGAGGAT GTGAGTCCGC TGCTGCAAGG GCTGGATGTG
CGCAGCCGGG ATTTTCACTG A
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| Protein sequence | MNTPGYAELH CLSNFSFQRG ASSADELFRR AREQGYQALA ITDECTLAGI VRAWQAAKVH
QLRLIVGSEV QLCDGPKLVL LVENLTGYQN LCALITRARR RAEKGAYQLF RDDLLLHHQG
LLALWVAADS GDTATGAWLR SVFAERLWLA VHLHRGSDDA MRLQRLRALA ADVGIRAVAC
GDVHMHVRGR RALQDCMTAI RQHCQVSEAG RFLFANGERH LRSQAQLAEL YPLDLLAETL
VIARRCQFDL SELNYQYPRE LVPEGHTPAS WLRELCEQGM PLRWPGGPSG KVRAVLAKEL
GLIEELGYES YFLTVHDIVA FARSQRILCQ GRGSAANSVV CFVLGITELD PMKHHLLFER
FLSRERNEPP DIDVDFEHDR REEVIQYVFR RYGRHRAALT AVVNTYHAAG AVRDVARVLG
LPADQVDALA KCCGRWSDRI PDDQRLAEAG FEAGSPSLRR VLVLAGELIG FPRHLSQHPG
GFVISQQPLD QLVPVENAAM PERTVIQWDK DDLDMVGLLK VDVLALGMLS ALRRCFDLLQ
HHRGRHLTLA TIPSEDPATY AMISRAETMG VFQIESRAQM AMLPRLRPQK FYDLVIEVAI
VRPGPIQGDM VHPYLRRRLK QEPVTYPSPQ LKEVFERTLG VPLFQEQVME LAMVAADYTP
GEADQLRRSM AAWKRHGGLE PHRERLVQGM LRNGYTLAFA ERIFEQIKGF GSYGFPESHA
ASFALLCYAS SWLKCHEPAI FTCALVNSWP MGFYSPDQLL QEARRQGIEV RPVDVCHSDW
DCTLEPDAEG TLAIRMGLRL VRGLAETDAR RVQQARAQRP WRNVEDLCLR AGLDARARAR
LADGGALRAL ASDRHQARWQ VAAVQPQLPL FADVQALPEE PVQLPVPTVG EDLMADYQTL
GTTLGPHPLA LLRSRLRALG CRSSSELQGV EHGDNIAVAG LVVGRQRPQT ASGVTFVTLE
DEHGMVNVVV WRALAERQRR ALVGSQLLKV SGRLEQENGV RHLIARRLED VSPLLQGLDV
RSRDFH
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