| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2593 |
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| Symbol | |
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| ID | 5193129 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 2954476 |
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| End bp | 2955132 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640587046 |
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| Product | 3-oxoacid CoA-transferase, B subunit |
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| Protein accession | YP_001267912 |
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| Protein GI | 148547810 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2057] Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit |
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| TIGRFAM ID | [TIGR02428] 3-oxoacid CoA-transferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCACTGA CCCGCGAACA GATGGCGCAA CGCGTTGCCC GTGAACTGAA GGACGGTTAC
TACGTCAATC TGGGCATCGG CATCCCCACC TTGGTGGCCA ACTATGTACC CGCCGACATG
GATGTGATGC TGCAATCGGA AAACGGCCTG CTCGGCATGG GCGAATTCCC CACCGAAAGC
ACCCTCGATG CCGACATGAT CAACGCCGGC AAGCAAACGG TCACCGCCCG CCGCGGTGCC
TCGATTTTCG ATTCGGCACA ATCGTTCGCC ATGATCCGTG GCGGCCACGT CGACCTGACC
GTACTGGGGG CTTTCGAGGT GGACGTGCAG GGCAACATCG CCTCGTGGAT GATTCCGGGC
AAGCTGGTCA AGGGCATGGG CGGGGCCATG GACCTGGTGG CCGGCGCCGA CAACATCATC
GTTACCATGA CCCACGCCTC CAAGGACGGC GAGTCCAAGT TGCTGCCACA GTGCAGCCTG
CCGTTGACCG GTGCGGGCTG CATCCGCAAG GTGCTGACCG ACCTGGCCTA CCTGGAAATC
GAAGACGGCG CCTTCATCCT GCGCGAGACC GCGCCTGGGG TCAGCGTCGA GGAAATCATC
GAGAAAACCG CCGGCAAACT GATCGTGCCG GATGACGTGA AGGAAATGAC CTTCTAA
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| Protein sequence | MALTREQMAQ RVARELKDGY YVNLGIGIPT LVANYVPADM DVMLQSENGL LGMGEFPTES
TLDADMINAG KQTVTARRGA SIFDSAQSFA MIRGGHVDLT VLGAFEVDVQ GNIASWMIPG
KLVKGMGGAM DLVAGADNII VTMTHASKDG ESKLLPQCSL PLTGAGCIRK VLTDLAYLEI
EDGAFILRET APGVSVEEII EKTAGKLIVP DDVKEMTF
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