| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2592 |
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| Symbol | |
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| ID | 5193128 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 2952904 |
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| End bp | 2954433 |
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| Gene Length | 1530 bp |
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| Protein Length | 509 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640587045 |
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| Product | short chain fatty acid transporter |
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| Protein accession | YP_001267911 |
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| Protein GI | 148547809 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2031] Short chain fatty acids transporter |
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| TIGRFAM ID | [TIGR00366] conserved hypothetical integral membrane protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCGGT ACATTGACCG CCGCATTCGC GGGTCAACCC GTTCCCACAG GTTTTTTGCG
TTGCCTGGCA ATACCGCTTC ATCCCATAAA ACCAATAAAA GGAATTCAAC CGTGGCCGCT
GAAATTCAAG ACAGCCGCTC CGCGCGCTTT GCCTTGCGCT GCTCCAACTG GGCTGAACGC
TGGTTCCCCG ACTCCTGGGT GTTCGCCGCG CTGGCGGTGC TGCTGGTGTG TATCGGCGCA
CTGGCCATGG GCGCCAAACC GACCGACACC GCCAAGGCGT TTGGCGACGG CTTCTGGAGC
CTGATACCGT TCACCATGCA GATGGCCTTC GTGGTCATCG GCGGTTATGT GGTGGCCAGC
TCGCCGCCCG CCGCGAGGCT GATCGATCGC CTGGCGCGCA TCCCCGGCAA TGGGCGCTCG
GCAGTGTGCT GGGTAGCACT GATCTCGATG CTGGCCTCCT TGCTCAACTG GGGGCTGTCG
CTGGTGTTTG GAGGTTTGTT GGTGCGCGCC TTGGCAAGGC GCACCGACCT GAAGATGGAC
TACCGCGCTG CGGGTGCGGC CGCTTACCTG GGCCTGGGTG CGGTGTGGGC GTTGGGCCTG
TCATCCTCGG CGGCGCAGCT GCAGGCCAAC CCGGCCAGCC TGCCACCTTC AATCCTGTCG
ATAACTGGGG TGATCCCGTT TACCGAAACC ATCTTTCTCT GGCAGTCCGG CGTGATGTTG
GCGGCACTGG TGGTGGTCTC GCTGGTGATC GCCTATGCCA CCGCTCCGGG CCCGAACAGC
GCACGTAGCG CAGAAGACTG CGGTGTCGAC CCCAGCTTCA CAGCGCCACC CGCGCCGCAA
CGCACGCGCC CGGGGGAGTG GCTGGAACAC AGCCCGATCC TGATCCTGCT GTTGGTGGCC
TTGGCTGCTG GCTGGCTGTA TCAGGAGTTT GCGACAAAAC CTGCGATTAC CGCCATCTCA
GGGCTCAACA CCTACAACCT GTTGTTCATC ATGCTCGGTG CTTTGCTGCA CTGGCGCCCA
CGCAGCTTCC TTGACGCGGT GGCACGCGCG GTACCGACCA CCACCGGTGT GCTCATCCAG
TTCCCGCTGT ATGGTTCGAT CGCCGCTATC CTCACCCAGG TGAAGGGCGT CGATGAACAG
ACGCTGGCCC ATCATATTTC ACTGTTCTTC ACCCAGATTG CCACCCATGA CACGTATGCC
GTGCTGATGG GCGTGTATTC GGCGGTGCTG GGCTTCTTCA TCCCTTCAGG CGGCGGCAAG
TGGATCATCG AGGCCCCTTA CGTGATGCTG GTGGCCAACG ACCTGCAGTA CCACCTGGGG
TGGGCCGTGC AGATCTACAA CGCGGCCGAA GCCTTGCCGA ACCTGATCAA CCCGTTCTAC
ATGCTGCCGC TGCTGGGCGT GCTGGGGCTC AAGGCGCGCG ACCTGATCGG TTTCTCGTTC
GTGCAATTGC TGGTGCATGT GCCGTTGGTG CTGGTGTTGC TGTGGGCGCT GGGTACAACG
CTGCAGTATG TGCCGCCCGT GATGCCTTGA
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| Protein sequence | MRRYIDRRIR GSTRSHRFFA LPGNTASSHK TNKRNSTVAA EIQDSRSARF ALRCSNWAER
WFPDSWVFAA LAVLLVCIGA LAMGAKPTDT AKAFGDGFWS LIPFTMQMAF VVIGGYVVAS
SPPAARLIDR LARIPGNGRS AVCWVALISM LASLLNWGLS LVFGGLLVRA LARRTDLKMD
YRAAGAAAYL GLGAVWALGL SSSAAQLQAN PASLPPSILS ITGVIPFTET IFLWQSGVML
AALVVVSLVI AYATAPGPNS ARSAEDCGVD PSFTAPPAPQ RTRPGEWLEH SPILILLLVA
LAAGWLYQEF ATKPAITAIS GLNTYNLLFI MLGALLHWRP RSFLDAVARA VPTTTGVLIQ
FPLYGSIAAI LTQVKGVDEQ TLAHHISLFF TQIATHDTYA VLMGVYSAVL GFFIPSGGGK
WIIEAPYVML VANDLQYHLG WAVQIYNAAE ALPNLINPFY MLPLLGVLGL KARDLIGFSF
VQLLVHVPLV LVLLWALGTT LQYVPPVMP
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