| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2588 |
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| Symbol | |
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| ID | 5194793 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 2948318 |
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| End bp | 2949880 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640587041 |
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| Product | lipopolysaccharide biosynthesis protein |
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| Protein accession | YP_001267907 |
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| Protein GI | 148547805 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis |
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| TIGRFAM ID | [TIGR03007] polysaccharide chain length determinant protein, PEP-CTERM locus subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTCTG ACTACGAGCT CTCCCTCAGA GATTACATCG CCATTATCAA GGACAGGGCC
CTGGTGTTAG GGGTGAGTGC CGCAGTCATT CTCGCCGCGA CCGTGGCCGT CGCGTTGATG
GTGCCGCCGA TCTACCAGTC GACCGGCACC ATTCTGGTGG AGTCGCAGCA GATTTCGCCT
GAACTGGTGT CGACCAACAA CACCAGCTTT GCCGATGAGC GCATCGAGGT GATCCGCCAA
CGGGTGATGA CCCGCGACAA CCTGCTGCGC ATCATCGGCA AGTACGACCT CTTCGCCGAC
AAGCGCTTCA GCGAAAGCGA CAAGATCGAC CAGATGCGCA ACGCGATCGT GGTCGAAACC
CTGACCACCT ACGTGCGCGG TCGTGGTGAA GCGACCGTGG CGTTCAATGT GTCGTTCGAG
CACAAACAGG CACAAGTAGC CAAGGAAGTC GCCGATGAAC TGGTGACGCT GTTCCTCAAT
GAAAACCTCA AGCAGCGCAC CGAACGGGCC AACGAAACCA CCGAATTCCT CACCCAGGAA
GCCAACAAGC TGGGTGCCGA GCTGGCCAGC CTGGAGAACC AGCTGGCCGA TTTCAAGCAG
GCCCATGCCA ATGCCTTGCC CGAGCACCAG ACCCTGCGCA TGAACATGCT GTCGCGGGCG
GAGCTGGAAT TCCGTGAGGT CGACCGTGAC TACAAGGCTG CCCAGGAAGA GCTGCGCTAC
CTGGAACTGG AGCTGTCTGC GGCCAATGCC GGCCTTGCCA CCAAGGTTGT CGAGGGCGCC
CGGCCAACCC GTGCCGACCT GCCCGAAGAC CTGCCAAGCC TGAAAGCCGA ATACGCGCAG
CTGCTGACCC GCTACAAGGA CGCCCACCCG GATGTCGTGG CGGTCAAGCG CAAGATCCAG
GCGCTCGAAG CCAGTGGTGG TCGCACTGCG GCAGCGTCCA CGGTCAGCCT CGACGCGGCC
CGTGTCCGCG CCAAGATGAG TGCCGCGCAG GTGCGTATTG CCTCGCTGGC AGAGCAAAAG
CGTGAGCTGA CCCGGAAAAT GGAAGGCTAT GAAGCCGAGA TCCTCGAGGC ACCGCAAGTC
GAGCGTGGCC TGGTGACCTT GATGCGTGAC CACGACAACG CGCGCAAGAA ATACGAAGAG
ATTCGTGCCA AGGAAATGGG TGCAAAGATT ACCGAAAGCC TCGAGCAGGA AAACAAGGCT
GAACGCTTTG TGCTGCTGGA GCCTCCTCTG TTGCCTGAGA AGCCGATCAA GCCTAACCGC
AAGAAAATCG CTGCGCTGGG CCTGGTACTG GCACCGGCCG GTGGCGGTGC GCTGGTGATG
CTGCTGGAAA TGCTCAATCA GCGCGTGCGC GGCGTTGGCG CCCTGGAAAA CCTGCTGGGC
AAACGGGTGC TGGTGGCACT GCCCTATATC GATACCCGGG CCGACGTGGC CCGCCGCAAG
CGCTGGCGCA ATCGCCTGAT CCTGGCGGCA CTGGCGTTGG CAGCTATCAT GATAGGGCTG
GTGCACGTGT TCTACATGCC ACTGGATGTG CTGTTGTACA AAGTCATGTC TCGGTTTGTA
TAG
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| Protein sequence | MKSDYELSLR DYIAIIKDRA LVLGVSAAVI LAATVAVALM VPPIYQSTGT ILVESQQISP
ELVSTNNTSF ADERIEVIRQ RVMTRDNLLR IIGKYDLFAD KRFSESDKID QMRNAIVVET
LTTYVRGRGE ATVAFNVSFE HKQAQVAKEV ADELVTLFLN ENLKQRTERA NETTEFLTQE
ANKLGAELAS LENQLADFKQ AHANALPEHQ TLRMNMLSRA ELEFREVDRD YKAAQEELRY
LELELSAANA GLATKVVEGA RPTRADLPED LPSLKAEYAQ LLTRYKDAHP DVVAVKRKIQ
ALEASGGRTA AASTVSLDAA RVRAKMSAAQ VRIASLAEQK RELTRKMEGY EAEILEAPQV
ERGLVTLMRD HDNARKKYEE IRAKEMGAKI TESLEQENKA ERFVLLEPPL LPEKPIKPNR
KKIAALGLVL APAGGGALVM LLEMLNQRVR GVGALENLLG KRVLVALPYI DTRADVARRK
RWRNRLILAA LALAAIMIGL VHVFYMPLDV LLYKVMSRFV
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