| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2581 |
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| Symbol | |
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| ID | 5195106 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 2939058 |
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| End bp | 2940524 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640587034 |
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| Product | GMC oxidoreductase |
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| Protein accession | YP_001267900 |
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| Protein GI | 148547798 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAAGG ACTTTCAGCA GCAGAAGGCG CTGCGCGACG ACTATGATTT CTGCATCATC
GGCGCCGGCC CGGCGGGTAT AACCCTGGGC TTGCGCCTGG CAGCCGCCGG CTGGAGCGTC
ATGATCGCCG AAGGCGGGGG GCGCGAATAT GCGCCGTATT CGCAAGACTT GTACGCGTGC
TCATCCACCG GCCTGGAACT GTATGCCGAG GAAACCCGCC TGCGTTACCT GGGTGGCACC
TCCAATCACT GGGCTGGCCG TTGCCGTCCA TTCACCCCCT CGGATTTTGC CGTCGCCCCG
CCAGGCGACT TGCCGGGTTG GCCAATTCCC TACTCGGAGA TCGAAGGCTT CCTGCCGGCA
GCGATGGAGA TCGTCGATCT GGCGCCTGGC TCGGATTTTC GCGCGATGAA TGCCGGCCTC
AATGGTGGTG ACTTCGAGGC GGACCGTTTT CTGCTCAGCA CGCCGACACG CTTTGCGCAA
AAGTACGCTT CAGCACTGGA GCAGACGCCA GGCCTGGACG TATTCATCCA CTGTAATTGC
GTTGACCTGG AGTTCGACAA GGCTTCCGGC CACCTGGCTG CGGTGGTGTT GTCCGACTAT
GAGCGCAATC GTCAACGCCT GGTGGCTGGC AATTTCATTC TGGCCACAGG TGCCATCGAG
AATGCCCGGC AGTTGCTCAA CAGCGAGACC TTGGTGGCCG CAGGCGTGGT GGGCAAGGAA
GGGCTGGTCG GCGGGTGTTT CATGGAACAC CTGAATATCG AAATGGGCAC ATTCATCCTT
AAGTCCGGGC AGGACCCAGA GCCGCGCCAG TACTACACCA CCGATGCTTT CGTCGACGAG
TACAAGGCCG GTAAAGGCAA TGTCACTGCT GTTTTGCTGG CCGATGTGCA GACCTATGGC
CGCACTGCCG AGGTGAAGTA TTTTCTCGAG AGCCTGGCCT GCGACATGGG GTTTGCCAAC
AAGGTCGCCT TCGTCGCCAA GTTCAGTTGC CCTGGTGACG GCGTGATCAG CACCATGATC
GAGCAGTTCC CCAACCTGCA CAGCCGTATT TCGCTGCTGG ACGAGAAGGA TGCGCTGGGC
GTGGCCAAGG TCAATGTCAA TTGGGTGCTG AGCGCCGAAG ATCGGCACAC CATCAAGTGC
ATTGGTAGCG AACTGGCCAA GCAGTTCGCC GACATGGATC TGGGGTTCGT CAAACTCAAC
GATTTCGTCT ACGACACCTC GATTCCGCTG AAAATGGCGC CTCATGCCCA TCACATGGGC
ACCACGCGTA TGGCCGCCTC GCCACAGTTC GGTGTAGTCG ATGCCAATTG CAAGGTGTTC
GGTACCGAAA ACCTGTATGT CGCCGGCAGC AGCATTTTTG CCAAGGGCGG CGCCTCCAAC
CCGACCATGC CGCTGTTGCA ATTTGCCTTG CGGCTGGCCG ACCACCTCGA TAACAAGATG
AAAGCGGCCA GCAGCGCCGC TGCTTGA
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| Protein sequence | MIKDFQQQKA LRDDYDFCII GAGPAGITLG LRLAAAGWSV MIAEGGGREY APYSQDLYAC
SSTGLELYAE ETRLRYLGGT SNHWAGRCRP FTPSDFAVAP PGDLPGWPIP YSEIEGFLPA
AMEIVDLAPG SDFRAMNAGL NGGDFEADRF LLSTPTRFAQ KYASALEQTP GLDVFIHCNC
VDLEFDKASG HLAAVVLSDY ERNRQRLVAG NFILATGAIE NARQLLNSET LVAAGVVGKE
GLVGGCFMEH LNIEMGTFIL KSGQDPEPRQ YYTTDAFVDE YKAGKGNVTA VLLADVQTYG
RTAEVKYFLE SLACDMGFAN KVAFVAKFSC PGDGVISTMI EQFPNLHSRI SLLDEKDALG
VAKVNVNWVL SAEDRHTIKC IGSELAKQFA DMDLGFVKLN DFVYDTSIPL KMAPHAHHMG
TTRMAASPQF GVVDANCKVF GTENLYVAGS SIFAKGGASN PTMPLLQFAL RLADHLDNKM
KAASSAAA
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