| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2579 |
|---|
| Symbol | |
|---|
| ID | 5193162 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 2937388 |
|---|
| End bp | 2938344 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640587032 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_001267898 |
|---|
| Protein GI | 148547796 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1216] Predicted glycosyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTAGCA AACCTGTGGA TGTCATGGTG GTCAACTTCA ACACCGCTGG ACTGCTGCAG
CCGATGTTCG ATGCACTGCG CCGGGCCGAC AGCGAGCGGC TGGCCAGTTA CCTGGTGGTC
GACAATGCCT CGCGCGATGA CTCGGTGCAG CGCATGGCCC AGGTATGCCC CGAGGCTCTG
CTGCTGAGCA ACAAGCAGAA CGTAGGGTTC GGCCGGGCCA ACAACCAGTT GTTGGCGCAC
CTCAAGGGCA AGTACGCCTT GCTGCTCAAT ACCGATGCCT TCGTTGCCGC CGACTCGCTG
CAAAAAACGC TCGACTACAT GGATGCCCAC CCGGAGTGCG GCGTACTGGG GGTGCGCCTG
GAGGGTCGCG ATGGCGACCT GCAACCAAGC TGTCGCTACT TCCCCACGCC GCTCAATGTG
TTCGTTGGGC GTACCGGGTT GGGGCGGTTC TTCCCAGGGG TGAAGATGGT TGACGACATG
AACTGGGACC ACGCCTCGGT GCGCGAGTGT GACTGGTTGC CCGGCTGCTT CTACCTGGTG
CGCCGCGAAG TGCTCGACAG GGTGGGGCTG TTCGACCCGC GCTACTTTCT TTATTACGAA
GAGGTGGACC ACTGCAAGCG GGTGAAGGAG GCTGGCTGGA AAGTGGTGTT CTACCCGCAT
ACCACGGTGG TGCATATCGG TGGCGAAAGC TCCAAGTCGG TGGCGGAGCT GGAGGCTGCC
AGCCGGCAGA TCTCGTCCTA TCAGATCGAA AGCGAGTTGC TGTACTTTCG CAAGCATCAC
GGGGTGGCGG GGCTTGCCCT GCACATGCTG CTGGTGACGC TGGGCGACTT GGTGCTGGCA
CTCAAGGCGC TGTTGAAACG ACGCGGCTGG GGCGCCATAC AGGCCTGCTG GCGTCATTGC
CGGGCAACCT GGTCTTTGCT GTTCAAGACC CGGTACGCCA GCCAACCGAC AAGGTAG
|
|---|
| Protein sequence | MTSKPVDVMV VNFNTAGLLQ PMFDALRRAD SERLASYLVV DNASRDDSVQ RMAQVCPEAL
LLSNKQNVGF GRANNQLLAH LKGKYALLLN TDAFVAADSL QKTLDYMDAH PECGVLGVRL
EGRDGDLQPS CRYFPTPLNV FVGRTGLGRF FPGVKMVDDM NWDHASVREC DWLPGCFYLV
RREVLDRVGL FDPRYFLYYE EVDHCKRVKE AGWKVVFYPH TTVVHIGGES SKSVAELEAA
SRQISSYQIE SELLYFRKHH GVAGLALHML LVTLGDLVLA LKALLKRRGW GAIQACWRHC
RATWSLLFKT RYASQPTR
|
|---|
| |