| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2570 |
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| Symbol | |
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| ID | 5191878 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 2927573 |
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| End bp | 2928949 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640587023 |
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| Product | L-serine dehydratase 1 |
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| Protein accession | YP_001267889 |
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| Protein GI | 148547787 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1760] L-serine deaminase |
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| TIGRFAM ID | [TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTATCA GTGTTTTCGA CCTTTTCAAA ATTGGTATCG GGCCGTCCAG TTCCCACACC
GTGGGCCCGA TGCGGGCGGC GGCTACCTTT GCCCAGGCCT TGCGTGCGCA GGGGCTGCTG
GCCCAGGTAA CGCGCGTGCA AGTGCGGCTG TATGGCTCGC TGTCGGCTAC CGGGGTTGGC
CATGCCACCG ACCGCGCGTG CCTACTAGGC TTGATGGGCC AGTGGCCGGA CCGTATCGAC
CCGTCCACGA TCGAGTCGCG CATCGGCCAG GTCCTGCAAG AGCACTGCCT GATGCTCGAC
GGTAGCCATC CGCTGGCCTT CGACTATGGC CGTGACATGC TGCTGCTCGA CGAGAGCCTG
CCTTATCACC CCAACGCCAT GAGCCTGGAC GCCATGGACG GGCAGCACAG CCTGTTGAGC
CAGACCTATT TTTCGGTGGG TGGCGGCTTC ATCGTCGAGC AAGCCGAAAT CGATTCGCCG
GCAAGCGACA CGAATGCCGT GATGCTGCCT TATGAATTCG ACAGTGGTGC CCAACTGCTG
GCTTTGTGCA AGGCCCACAA CCTGAGTGTG GCGCAACTGA TGATGGCCAA CGAGTGCGCC
TGGCGCCCGG AGGCCGAGGT GCGCGAAGGC TTGCTGCGCA TCTGGGCGGC CATGCGTGAG
TGCGTGGCGA ACGGCTTGCG CAACGAGGGC GTCCTGCCGG GCGGCTTGCA CGTCAAGCGC
CGCGCCGCGC GGTTGCATCG CAGCCTGCAG GAGTTGGGCA AGCCCAACGT GATCGGCTCG
ACCCTTGGCG CCATGGAGTG GGTCAACCTG TTCGCCTTGG CGGTCAATGA AGAGAATGCC
GCCGGTGGGC GTATGGTTAC CGCGCCCACC AACGGGGCAG CCGGCATTAT CCCGGCGGTG
CTGCACTATT ACATGAAGTT CAACCCCGGT GCCTGCGATG CTGATGTGGT GGACTTCCTG
CTTGGCGCAG CGGCGGTTGG CATCCTGTGC AAAAAGAACG CCTCGATTTC CGGTGCCGAG
GTGGGTTGTC AGGGGGAGGT GGGCTCAGCC TGTTCGATGG CTGCTGCCGG CTTGGCGCAG
GTACTGGGTG CTACGCCGCC CCAGCTTGAA AACGCCGCCG AAATTGCCCT GGAGCACAAT
CTTGGGCTGA CCTGCGACCC GGTGGGTGGC CTGGTGCAGG TGCCGTGCAT CGAGCGCAAT
GCGATTGCTG CGGTCAAGGC GATCAATGCT GTGCAGATGG CGCTGCGGGG GGATGGCGAG
CACTTCATCT CGCTCGACCG GGTGATCCGC ACCCTGCGTG ATACCGGGGC GGACATGCAT
GCCAATTACA AGGAAACCTC GCGCGGCGGT TTGGCGGTCG CTTTTGTCGA GTGCTGA
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| Protein sequence | MAISVFDLFK IGIGPSSSHT VGPMRAAATF AQALRAQGLL AQVTRVQVRL YGSLSATGVG
HATDRACLLG LMGQWPDRID PSTIESRIGQ VLQEHCLMLD GSHPLAFDYG RDMLLLDESL
PYHPNAMSLD AMDGQHSLLS QTYFSVGGGF IVEQAEIDSP ASDTNAVMLP YEFDSGAQLL
ALCKAHNLSV AQLMMANECA WRPEAEVREG LLRIWAAMRE CVANGLRNEG VLPGGLHVKR
RAARLHRSLQ ELGKPNVIGS TLGAMEWVNL FALAVNEENA AGGRMVTAPT NGAAGIIPAV
LHYYMKFNPG ACDADVVDFL LGAAAVGILC KKNASISGAE VGCQGEVGSA CSMAAAGLAQ
VLGATPPQLE NAAEIALEHN LGLTCDPVGG LVQVPCIERN AIAAVKAINA VQMALRGDGE
HFISLDRVIR TLRDTGADMH ANYKETSRGG LAVAFVEC
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