| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2558 |
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| Symbol | |
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| ID | 5191300 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 2912622 |
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| End bp | 2913512 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640587011 |
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| Product | UspA domain-containing protein |
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| Protein accession | YP_001267877 |
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| Protein GI | 148547775 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAGT TCAAACGTCT GTTCGTCATG CTCGGCCCGC AAATGCGTCA TACGCCTGCG
CTGCAACGCG CGGCGGCGTT GGCAGAGTCC AGCGGTGCCC TGCTGGATAT CAATGTGTTC
GTCGACGACG TCGACACCTT TGGCTTGATG AGCGATGGTC GTGAGCGTGA GCGGCTGCTC
AGCGACAACC GCCAGTGGCT GGCGGATGAG GCCGAACAGC TGAGCGATGC CGGTGTGGAC
GTGTCCACCG AGCTGTTGTT GACCCGCGAC CCGCTGGGCA GCGTACTGGA ACGGGTCGAA
CGGCTGGGCT GCGATCTGTT GGTCAAGGAC GTACAGCACG AGCCCGTACT CAAACGCCTG
CTGGTCACGC CGCTGGACTG GCAGTTGCTC AAGGACAGCC CGGTCGCCGT GCACCTGGTC
AGCGACATTC GCCTGCCCCT GCCACGGCAG ATCGCCGCCG CGGTGGACCT GAACAGCCAC
GGCGCTGGCG AACACCTGGA CGAGCAGGTC ATCCAGTGCG CCCATGACCT GGCCCTGCAG
TGCAACGCCG AACTACACCT GCTGCATGTG TGCGACGCGG CCAAGACCCA CATCGCCGAC
TTCGGCGCCG GTACGGTCAC CATGCCCGGC TTCGACAGCA GTGTGCGAAC CGCGCAGCGG
GCGGCGTTCA ACCGCCTGGG CGACCATCAC CAGATCCCGC TGGAGCGCCG GCACTTCCTC
GAAGGGGCCG CGATCAGGGC CATTGCCCAG TTCGTCGGCC ACAACCGGGT GGACGTGATC
GTCATGGGCA GCCACCGGCA TGACGCCATG CAGACATTCC TGGGCGGGAC AACGGCGCAT
GTGCTGGAAC ACCCGCTGTG CAATGTGCTG GCGATCAAGG CTGTTCGCTG A
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| Protein sequence | MSQFKRLFVM LGPQMRHTPA LQRAAALAES SGALLDINVF VDDVDTFGLM SDGRERERLL
SDNRQWLADE AEQLSDAGVD VSTELLLTRD PLGSVLERVE RLGCDLLVKD VQHEPVLKRL
LVTPLDWQLL KDSPVAVHLV SDIRLPLPRQ IAAAVDLNSH GAGEHLDEQV IQCAHDLALQ
CNAELHLLHV CDAAKTHIAD FGAGTVTMPG FDSSVRTAQR AAFNRLGDHH QIPLERRHFL
EGAAIRAIAQ FVGHNRVDVI VMGSHRHDAM QTFLGGTTAH VLEHPLCNVL AIKAVR
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