Gene Pput_2552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_2552 
Symbol 
ID5191779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp2906448 
End bp2907458 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content63% 
IMG OID640587005 
Productoxidoreductase FAD/NAD(P)-binding subunit 
Protein accessionYP_001267871 
Protein GI148547769 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism 
COG ID[COG0543] 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases
[COG0633] Ferredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTACC AGATCGCACT GAATTTCGAA GACGGGGTTA CCCGTTTCAT TGAAGCCACC 
GGTCAGGAAA CCGTGGCCGA CGCCGCTTAC CGCCAAGGCA TAAACATTCC GCTGGACTGC
CGTGACGGCG CTTGCGGGAC CTGCAAGTGC AAGGCTGAGT CCGGTCATTA TGACCTTGGC
GACAACTTCA TCGAAGACGC CTTGAGCGAA GACGAAATCG CCGAAGGCTA CGTGCTGACG
TGCCAGATGC GCGCCGAAAG CGACTGCGTC ATCCGCATCC CGGCTTCGTC GCAGCTGTGC
AAGACCGAGC AGGCCAGTTT CGAGGCCGCC ATCAGCGATG TCCGCCAGCT GTCAGTCAGC
ACCATTGCCC TGTCGATCAA GGGGGAGGCC CTGAGCCGTC TGGCCTTCCT GCCGGGGCAG
TATGTCAACC TCAAGGTGCC GGGCAGCGAG CAGAGCCGGG CCTACTCGTT CAGCTCGCTG
CAGAAGGACG GCGAAGTCAG CTTCCTAATC CGCAACGTAC CAGGTGGGCT GATGAGCAGC
TTCCTGACCA ACCTTGCCAA GGCTGGCGAC AGCCTGAGCC TGGCCGGGCC GTTGGGCAGC
TTCTATCTGC GGCCGATCCA GCGCCCGCTG TTGCTGCTGG CGGGTGGTAC CGGGCTGGCA
CCCTTCACCG CGATGCTGGA GAAGATCGCC GAGCAGGGCA GTGAGCACCC GTTGCACCTG
ATCTACGGCG TGACCAACGA CTTCGACCTG GTCGAGCTCG ACCGCCTGCA AGCGCTGGCG
GCACGCATCC CCAACTTTAC CTACAGCGCC TGCGTCGCCA ACCCGGACAG CCAGTACCCG
CAGAAGGGCT ATGTCACCCA GCACATCGAG CCACGCCACC TCAATGACGG CGATGTGGAC
GTATACCTGT GCGGGCCGCC CCCCATGGTG GAAGCGGTCA GCCAGTACGT GCGCGAACAG
GGCATTACCC CGGCCAACTT CTACTACGAG AAGTTTGCGG CTGCGGCCTG A
 
Protein sequence
MSYQIALNFE DGVTRFIEAT GQETVADAAY RQGINIPLDC RDGACGTCKC KAESGHYDLG 
DNFIEDALSE DEIAEGYVLT CQMRAESDCV IRIPASSQLC KTEQASFEAA ISDVRQLSVS
TIALSIKGEA LSRLAFLPGQ YVNLKVPGSE QSRAYSFSSL QKDGEVSFLI RNVPGGLMSS
FLTNLAKAGD SLSLAGPLGS FYLRPIQRPL LLLAGGTGLA PFTAMLEKIA EQGSEHPLHL
IYGVTNDFDL VELDRLQALA ARIPNFTYSA CVANPDSQYP QKGYVTQHIE PRHLNDGDVD
VYLCGPPPMV EAVSQYVREQ GITPANFYYE KFAAAA