| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2551 |
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| Symbol | benD |
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| ID | 5191963 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 2905493 |
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| End bp | 2906254 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640587004 |
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| Product | 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase |
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| Protein accession | YP_001267870 |
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| Protein GI | 148547768 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACAACA GATTCCAAGG CAAGGTCGCC CTGGTCACCG GTGCCGCCCA AGGCATCGGC
CGGGGTGTGT GCTGGCGGCT CAAGGCCGAA GGTGCGCAAG TGGTGGCCGT AGACCGTTCC
GAACTGGTCC ACGAGCTGGC CGGCGAAGGC ATGCTCACCC TCACCGCCGA CCTGGAGCAA
CACACCGACT GCGCCCGGGT CATGGCCAGT GCGGTGGAAA CCTTCGGCCG CCTCGACGTC
TTGGTCAACA ACGTCGGCGG CACCATCTGG GCCAAGCCTT TCGAGCACTA CGATGTCGAG
CAGATCGAGG CCGAAGTGCG CCGTTCGCTA TTCCCGACAC TGTGGTGCTG CCATGCCGCG
CTGCCCTACA TGCTTGAACG TGGCAACGGC GTCATCGTCA ACGTTTCTTC CATCGCCACC
CGTGGCGTCA ACCGTGTGCC CTATGGCGCG GCCAAAGGCG GCGTCAATGC GCTCACCGCC
TGCCTGGCCT TCGAAACGGC TGGCCGTGGG ATCCGCGTCA ACGCCACCGC GCCGGGTGGC
ACCGAAGCGC CGCCCCGGCG CGTACCGCGC AACAGTGCAG CGCAAACCGA GCAGGAAAAG
CACTGGTACC AGCAGATCGT CGACCAGACC CTCGACAGCA GCCTGATGCA CCGCTACGGC
AGTATCGACG AGCAGGTGGG GGCCATTTTG TTCCTCGCGT CCGACGAAGC CTCGTACATC
ACCGGCGTGA CCCTGCCGGT TGGGGGCGGC GACCTGGGCT GA
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| Protein sequence | MNNRFQGKVA LVTGAAQGIG RGVCWRLKAE GAQVVAVDRS ELVHELAGEG MLTLTADLEQ
HTDCARVMAS AVETFGRLDV LVNNVGGTIW AKPFEHYDVE QIEAEVRRSL FPTLWCCHAA
LPYMLERGNG VIVNVSSIAT RGVNRVPYGA AKGGVNALTA CLAFETAGRG IRVNATAPGG
TEAPPRRVPR NSAAQTEQEK HWYQQIVDQT LDSSLMHRYG SIDEQVGAIL FLASDEASYI
TGVTLPVGGG DLG
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