| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2539 |
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| Symbol | |
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| ID | 5192408 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 2890693 |
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| End bp | 2891790 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640586992 |
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| Product | transcriptional regulator, CdaR |
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| Protein accession | YP_001267858 |
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| Protein GI | 148547756 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3835] Sugar diacid utilization regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGAAC TCGACCATGA CCTGGCGCAG GATATCGTTG ACCGGGCAAT GGCCATCTTG
CCTTGCAACG TCAATGTCAT GGACAGCCAA GGGTTGATCC TGGGCAGTGG TGAGCCTGAG
CGCATCAACA CCCGTCACGA GGGGGCGCAG CTGGTCTTGG CCAATGGCCG GATCGTCGAG
CTGGATACTG ACGCGGCCAA GTGCCTGAAG GGCGTGCAGC CCGGTGTGAA CCTGCCATTG
ATGCTCGATG GGCGGCTGAT GGGCGTGTTG GGCCTGACCG GCGACCCGCA GCAGGTGCGC
ACCTATGGCG AGCTGGTGCG CATGACCGCC GAAATGCTGC TGGCCCAACG CAATTTACAG
GCTGACCAGC AATGGCGAAG GCAGCGCTGT GACGACCTGC TGGCGCTATT GCTCGGCGGC
AGCGGTAACT CGCCGCGCTT GCTGGACGAA GCCCGTCAGT TGGGCTTGAA ACCTCAGCTA
CCGCGGATAC CGTGCCTGTT CGAGATTGCC TCGGGGCCAC CTGCCGAGGC GCTGGCCGCA
TGGTTGATGA GCCGTTATCC GGATAGCTGG TGCGTCAGCC CGGCCCGCCA GTCGTTGCTG
TGGTGCCGCC CGGCAGGCGT GGCACTGGAT GAACTGCGCC TGCTGGAACG CCTGCAACGC
CACGGTTGGG ACATTGAGCG ACTGGCCCTG GGCAGTGCAG CGCAGAGCCT GGAGCAGTTA
CGCCGTGGTT ACCGCCGGGT GCGTGACTTG CTGGCCTATG GCCGCGAAGT GTTGCCCAGC
GAACGATTGC TCAGCCTGCA GCGCTACCGG CTGCCGGCGC TGCTGTGGCG CCACCGTAAC
GACGACGCGC TGGACGAGCT GCTGGAGCCG TTGCAGCGCA TCCGCGCCAA GGACAGCAGT
GGCCAGTTAC TCGCCACCCT GCGCGCCTGG TGTGCCCATG ACGGCCAGAG CCAGTCCTGT
GCCGATGCCC TGGGCATCCA CCGCAACAGC CTGCGCTATC GACTGGAGCG CATAGCCGAG
CTGGGTGAGG TCGACCCGCT GCGCCTGGAA GGGATGCTTA GCTTGTATCT GGGGTTGCAG
CTGTTGCCCG CTGACTGA
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| Protein sequence | MFELDHDLAQ DIVDRAMAIL PCNVNVMDSQ GLILGSGEPE RINTRHEGAQ LVLANGRIVE
LDTDAAKCLK GVQPGVNLPL MLDGRLMGVL GLTGDPQQVR TYGELVRMTA EMLLAQRNLQ
ADQQWRRQRC DDLLALLLGG SGNSPRLLDE ARQLGLKPQL PRIPCLFEIA SGPPAEALAA
WLMSRYPDSW CVSPARQSLL WCRPAGVALD ELRLLERLQR HGWDIERLAL GSAAQSLEQL
RRGYRRVRDL LAYGREVLPS ERLLSLQRYR LPALLWRHRN DDALDELLEP LQRIRAKDSS
GQLLATLRAW CAHDGQSQSC ADALGIHRNS LRYRLERIAE LGEVDPLRLE GMLSLYLGLQ
LLPAD
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