Gene Pput_2533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_2533 
Symbol 
ID5194891 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp2882902 
End bp2883885 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content61% 
IMG OID640586986 
Productelectron transport protein SCO1/SenC 
Protein accessionYP_001267852 
Protein GI148547750 
COG category[R] General function prediction only 
COG ID[COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGGCT CATGGCGTTT CCTGCTGGTA CTCGCGTTGT TCGCCGCCAG CATTCCGTTC 
TGGCCGCTGC AACCCCAACG AACGGTGGCC GAAGCAGCGG CCTCTCCCTG GGGGGCCAGC
TATTTCCCCA ACATCCCCTT GCTCACTCAG GACGGCGAAA AAGTGCATTT CTTCGACGAC
CTGATCAAGG ACAAGGTGGT CGCCATCAAC TTCATCTTTA CCGGCTGCTC CGACTCCTGC
CCAGTGGAAA CCGCTCGCCT GCGCCAGGTA CAGAAAATCC TCGGTGACCG GGTCGGCAAA
GACATCTTCC TCTACTCCAT CAGCATCGAC CCCTATAACG ACACCCCCGC CACCCTCAAA
CGCTATGCCG AAAAGTTCGG CATCGGCCCA GGCTGGACCT TGCTGACCGG CGAACCCGAC
GACATCGAGC AACTACGCCG CAGCCTGGGG CTGTGGATCG ATGGCCTGGA AAACGGCCGC
TCCAAAGACC ACAACCTGAG CCTCATCATC GGCAACCAGG CCACCGGCCG CTGGATGAAA
GCCTCGCCTT TCGAAAGCCC GTACATCCTC GCAGACCGCC TGGGCAACAG CCTGCACAAC
TGGAAGCAGG CCAGCGCCAT GAGCAATGAC TACGCTCAGG CTCCGCAAAT TCGCTCACCC
AGCAGCGGCG AGCAGATATT CCGTACCCGC TGCTCGTCCT GCCATACCGT GGGCAACACC
GAGCCAGGCC AGCCAGGCAT CGGCCCCGAC CTGCTGGGCG TGACCCGTCA GCGTGACGCC
AACTGGCTGG CCCGCTGGCT CAAGGTGCCC GACCAGATGC TGGCCGAAAA AGACCCCTTG
GCCATGCTGC TGTTCGAACA ATACAACCGC CTGGCCATGC CCAACATGCG CTTGGGCGAT
GCCGAAGTCA GCGCAGTGAT GAGCTACCTC GAAGAGGAAA CGGCTCGCTT GCAAACACCC
ATGGCTAATA GGGAAATCCC CTAA
 
Protein sequence
MPGSWRFLLV LALFAASIPF WPLQPQRTVA EAAASPWGAS YFPNIPLLTQ DGEKVHFFDD 
LIKDKVVAIN FIFTGCSDSC PVETARLRQV QKILGDRVGK DIFLYSISID PYNDTPATLK
RYAEKFGIGP GWTLLTGEPD DIEQLRRSLG LWIDGLENGR SKDHNLSLII GNQATGRWMK
ASPFESPYIL ADRLGNSLHN WKQASAMSND YAQAPQIRSP SSGEQIFRTR CSSCHTVGNT
EPGQPGIGPD LLGVTRQRDA NWLARWLKVP DQMLAEKDPL AMLLFEQYNR LAMPNMRLGD
AEVSAVMSYL EEETARLQTP MANREIP